MirGeneDB 3.0
MirGeneDB ID

Laf-Mir-148-P3

Family name MIR-148 (all species)
Seed CAGUGCA
Species African bush elephant (Loxodonta africana)
MiRBase ID
Paralogues Laf-Mir-148-P1  Laf-Mir-148-P4 
Orthologues Ami-Mir-148-P3  Bta-Mir-148-P3  Cfa-Mir-148-P3  Cja-Mir-148-P3  Cmi-Mir-148-P3  Cpi-Mir-148-P3  Cpo-Mir-148-P3  Dno-Mir-148-P3  Dre-Mir-148-P3  Ebu-Mir-148  Eca-Mir-148-P3  Gmo-Mir-148-P3  Hsa-Mir-148-P3  Loc-Mir-148-P3  Mal-Mir-148-P3  Mdo-Mir-148-P3  Mml-Mir-148-P3  Mmr-Mir-148-P3  Mmu-Mir-148-P3  Neu-Mir-148-P3  Oan-Mir-148-P3  Ocu-Mir-148-P3  Pab-Mir-148-P3  Rno-Mir-148-P3  Sha-Mir-148-P3  Spt-Mir-148-P3  Sto-Mir-148-P3  Tni-Mir-148-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000001905.1_Loxafr3.0)		 GL010058.1: 20280003-20280063 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAGGAGGCUCACGCCGCUGUCCCCCCGGCCCAGGUUCUGUGAUACACUCUGACUCGGGCUCUGGAGCAGUCAGUGCAUGACAGAACUUGGGCCCGAGGGACCUUCUGCACUCGACAGUGCC
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Structure
        10          20        30        40        50        60 
GAGGAGGCUCACGCCGCU--|    CCC              G  A    CU    CGGGCU 
                    GUCCC   GGCCCAGGUUCUGU AU CACU  GACU      \
                    CAGGG   CCGGGUUCAAGACA UA GUGA  CUGA      C
CCGUGACAGCUCACGUCUUC^    AGC              G  C    --    CGAGGU 
 .       110       100        90        80          70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
Wh
Star sequence

Laf-Mir-148-P3_5p* (predicted)
mirBase accessionNone
Sequence 
0- CAGGUUCUGUGAUACACUCUGACU -24
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Mature sequence

Laf-Mir-148-P3_3p
mirBase accessionNone
Sequence 
39- UCAGUGCAUGACAGAACUUGGG -61
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