MirGeneDB 3.0
MirGeneDB ID

Ocu-Mir-148-P3

Family name MIR-148 (all species)
Seed CAGUGCA
Species Rabbit (Oryctolagus cuniculus)
MiRBase ID ocu-mir-152
Paralogues Ocu-Mir-148-P1  Ocu-Mir-148-P4 
Orthologues Ami-Mir-148-P3  Bta-Mir-148-P3  Cfa-Mir-148-P3  Cja-Mir-148-P3  Cmi-Mir-148-P3  Cpi-Mir-148-P3  Cpo-Mir-148-P3  Dno-Mir-148-P3  Dre-Mir-148-P3  Ebu-Mir-148  Eca-Mir-148-P3  Gmo-Mir-148-P3  Hsa-Mir-148-P3  Laf-Mir-148-P3  Loc-Mir-148-P3  Mal-Mir-148-P3  Mdo-Mir-148-P3  Mml-Mir-148-P3  Mmr-Mir-148-P3  Mmu-Mir-148-P3  Neu-Mir-148-P3  Oan-Mir-148-P3  Pab-Mir-148-P3  Rno-Mir-148-P3  Sha-Mir-148-P3  Spt-Mir-148-P3  Sto-Mir-148-P3  Tni-Mir-148-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(oryCun2_add)		 chr19: 39313272-39313330 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAGGCUCUCGGCGCCGCUGUCCCCCGGCCCAGGUUCUGUGAUACACUCCGACUCGGGCUCUGGAGCAGUCAGUGCAUGACAGAACUUGGGCCCGGAAGGACCUUCUGCACCCAGCGGGC
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Structure
        10        20          30        40        50          
CAGGCUCUCGGCGCCGCU    --| C              G  A    CC    CGGGCU 
                  GUCC  CC GGCCCAGGUUCUGU AU CACU  GACU      \
                  CAGG  GG CCGGGUUCAAGACA UA GUGA  CUGA      C
CGGGCGACCCACGUCUUC    AA^ C              G  C    --    CGAGGU 
       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
He Ki Te To Wh
Star sequence

Ocu-Mir-148-P3_5p*
mirBase accessionMIMAT0048267
Sequence 
0- AGGUUCUGUGAUACACUCCGACU -23
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Mature sequence

Ocu-Mir-148-P3_3p
mirBase accessionMIMAT0048268
Sequence 
38- UCAGUGCAUGACAGAACUUGG -59
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