MirGeneDB 3.0

MirGeneDB ID

Mmr-Mir-148-P3

Family name MIR-148 (all species)
Seed CAGUGCA
Species Gray mouse lemur (Microcebus murinus)
MiRBase ID mmr-mir-152
Paralogues Mmr-Mir-148-P1  Mmr-Mir-148-P4 
Orthologues Ami-Mir-148-P3  Bta-Mir-148-P3  Cfa-Mir-148-P3  Cja-Mir-148-P3  Cmi-Mir-148-P3  Cpi-Mir-148-P3  Cpo-Mir-148-P3  Dno-Mir-148-P3  Dre-Mir-148-P3  Ebu-Mir-148  Eca-Mir-148-P3  Gmo-Mir-148-P3  Hsa-Mir-148-P3  Laf-Mir-148-P3  Loc-Mir-148-P3  Mal-Mir-148-P3  Mdo-Mir-148-P3  Mml-Mir-148-P3  Mmu-Mir-148-P3  Neu-Mir-148-P3  Oan-Mir-148-P3  Ocu-Mir-148-P3  Pab-Mir-148-P3  Rno-Mir-148-P3  Sha-Mir-148-P3  Spt-Mir-148-P3  Sto-Mir-148-P3  Tni-Mir-148-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_000165445.3_Mmur_3.0_genomic)
CM007676.1: 26922037-26922097 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAGGAGGCUCGGCCCGCUGUCCCCCCGGCCCAGGUUCUGUGAUACACUCUGACUCGGGCUCUGGAGCAGUCAGUGCAUGACAGAACUUGGGCCCGGAAGGACCUUCUGCACCCAACGGGCA
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Structure
        10         20         30        40        50        60 
GAGGAGGCUCGGCCCGCU-    CC  -|             G  A    CU    CGGGCU 
                   GUCC  CC GGCCCAGGUUCUGU AU CACU  GACU      \
                   CAGG  GG CCGGGUUCAAGACA UA GUGA  CUGA      C
ACGGGCAACCCACGUCUUC    AA  C^             G  C    --    CGAGGU 
 .       110       100        90        80          70
Deep sequencing
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CommentThere is a second Drosha cut +1 on both arms.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Mu Mu Mu Mu Mu Mu Mu Mu
Star sequence

Mmr-Mir-148-P3_5p* (predicted)

mirBase accessionMIMAT0049147
Sequence
0- CAGGUUCUGUGAUACACUCUGACU -24
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Mature sequence

Mmr-Mir-148-P3_3p

mirBase accessionNone
Sequence
39- UCAGUGCAUGACAGAACUUGGG -61
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