MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-148-P3

Family name MIR-148 (all species)
Seed AGUUCUG
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-148-P2 
Orthologues Ami-Mir-148-P3  Bta-Mir-148-P3  Cfa-Mir-148-P3  Cja-Mir-148-P3  Cmi-Mir-148-P3  Cpi-Mir-148-P3  Cpo-Mir-148-P3  Dno-Mir-148-P3  Dre-Mir-148-P3  Ebu-Mir-148  Eca-Mir-148-P3  Gmo-Mir-148-P3  Hsa-Mir-148-P3  Laf-Mir-148-P3  Loc-Mir-148-P3  Mdo-Mir-148-P3  Mml-Mir-148-P3  Mmr-Mir-148-P3  Mmu-Mir-148-P3  Neu-Mir-148-P3  Oan-Mir-148-P3  Ocu-Mir-148-P3  Pab-Mir-148-P3  Rno-Mir-148-P3  Sha-Mir-148-P3  Spt-Mir-148-P3  Sto-Mir-148-P3  Tni-Mir-148-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884780.1: 550961-551019 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UAAACAUUUUGGAUUGCAAGCUCCUGGUCUAAGUUCUGUGAUACACUCUGACUGUGAAUCUAUGCUAGUCAGUGCAUAACAGAACUUUGUCCCGGGUCUGAAAGCUCUUCGCAAGGACG
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Structure
        10          20        30         40        50          
UAAACAUUUUGGAUUGCA--| CU     UCU-         G  A    CU    GUGAAU 
                    AG  CCUGG    AAGUUCUGU AU CACU  GACU      \
                    UC  GGGCC    UUCAAGACA UA GUGA  CUGA      C
GCAGGAACGCUUCUCGAAAG^ U-     CUGU         A  C    --    UCGUAU 
       110       100         90        80          70
Deep sequencing
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CommentThe highest read count is monoadenylated at the 3' end of the 3p arm.
3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Fe Fe In Ma Ma
Mature sequence

Mal-Mir-148-P3_5p
mirBase accessionNone
Sequence 
0- AAGUUCUGUGAUACACUCUGACU -23
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Co-mature sequence

Mal-Mir-148-P3_3p
mirBase accessionNone
Sequence 
38- UCAGUGCAUAACAGAACUUUG -59
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