MirGeneDB 3.0
MirGeneDB ID

Ami-Mir-148-P3

Family name MIR-148 (all species)
Seed CAGUGCA
Species American alligator (Alligator mississippiensis)
MiRBase ID ami-mir-152
Paralogues Ami-Mir-148-P4 
Orthologues Bta-Mir-148-P3  Cfa-Mir-148-P3  Cja-Mir-148-P3  Cmi-Mir-148-P3  Cpi-Mir-148-P3  Cpo-Mir-148-P3  Dno-Mir-148-P3  Dre-Mir-148-P3  Ebu-Mir-148  Eca-Mir-148-P3  Gmo-Mir-148-P3  Hsa-Mir-148-P3  Laf-Mir-148-P3  Loc-Mir-148-P3  Mal-Mir-148-P3  Mdo-Mir-148-P3  Mml-Mir-148-P3  Mmr-Mir-148-P3  Mmu-Mir-148-P3  Neu-Mir-148-P3  Oan-Mir-148-P3  Ocu-Mir-148-P3  Pab-Mir-148-P3  Rno-Mir-148-P3  Sha-Mir-148-P3  Spt-Mir-148-P3  Sto-Mir-148-P3  Tni-Mir-148-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCF_000281125.3_ASM28112v4_AMI_add)		 NW_017708231.1: 2942476-2942534 [-] UCSC
Precursor
(pre-Mir +30nt flank)
GGACCCAGCCCCUCACAGUCCUCUCAGCUCAGGUUCUGUGGUACACUUGGACUCGGACUCUGGAGCAGUCAGUGCAUGACAGAACUUGGGUUUGGAUGGACCCACACACGGAGCUGAGC
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Structure
        10         20         30        40        50          
GGACCCAGCCCCUCACA-    -|  C              G  A    UG    CGGACU 
                  GUCC UCU AGCUCAGGUUCUGU GU CACU  GACU      \
                  CAGG AGG UUGGGUUCAAGACA UA GUGA  CUGA      C
CGAGUCGAGGCACACACC    U^  U              G  C    --    CGAGGU 
       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
To
Star sequence

Ami-Mir-148-P3_5p*
mirBase accessionMIMAT0038182
Sequence 
0- AGGUUCUGUGGUACACUUGGACU -23
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Mature sequence

Ami-Mir-148-P3_3p
mirBase accessionMIMAT0038183
Sequence 
38- UCAGUGCAUGACAGAACUUGG -59
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