MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-148-P3

Family name MIR-148 (all species)
Seed CAGUGCA
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues Cja-Mir-148-P1  Cja-Mir-148-P4 
Orthologues Ami-Mir-148-P3  Bta-Mir-148-P3  Cfa-Mir-148-P3  Cmi-Mir-148-P3  Cpi-Mir-148-P3  Cpo-Mir-148-P3  Dno-Mir-148-P3  Dre-Mir-148-P3  Ebu-Mir-148  Eca-Mir-148-P3  Gmo-Mir-148-P3  Hsa-Mir-148-P3  Laf-Mir-148-P3  Loc-Mir-148-P3  Mal-Mir-148-P3  Mdo-Mir-148-P3  Mml-Mir-148-P3  Mmr-Mir-148-P3  Mmu-Mir-148-P3  Neu-Mir-148-P3  Oan-Mir-148-P3  Ocu-Mir-148-P3  Pab-Mir-148-P3  Rno-Mir-148-P3  Sha-Mir-148-P3  Spt-Mir-148-P3  Sto-Mir-148-P3  Tni-Mir-148-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021919.1: 114337348-114337406 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGAGGCUCGGCCCGCUGUCCCCCCCGGCCCAGGUUCUGUGAUACACUCCGACUCGGGCUCUGGAGUAGUCAGUGCAUGACAGAACUUGGGCCCGGAAGGACCUUCUGCACCCAACGGGC
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Structure
        10          20        30        40        50          
GGAGGCUCGGCCCGCUG--|  CC  C              G  A    CC  CUCGGGCU 
                   UCC  CC GGCCCAGGUUCUGU AU CACU  GA        \
                   AGG  GG CCGGGUUCAAGACA UA GUGA  CU        C
CGGGCAACCCACGUCUUCC^  AA  C              G  C    --  GAUGAGGU 
       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Star sequence

Cja-Mir-148-P3_5p* (predicted)
mirBase accessionNone
Sequence 
0- AGGUUCUGUGAUACACUCCGA -21
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Mature sequence

Cja-Mir-148-P3_3p
mirBase accessionNone
Sequence 
38- UCAGUGCAUGACAGAACUUGG -59
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