MirGeneDB 2.1

MirGeneDB ID

Hsa-Mir-148-P3

Family name MIR-148 (all species)
Seed CAGUGCA
Species Human (Homo sapiens)
MiRBase ID hsa-mir-152
Paralogues Hsa-Mir-148-P1  Hsa-Mir-148-P4 
Orthologues Ami-Mir-148-P3  Bta-Mir-148-P3  Cfa-Mir-148-P3  Cmi-Mir-148-P3  Cpi-Mir-148-P3  Cpo-Mir-148-P3  Dno-Mir-148-P3  Dre-Mir-148-P3  Ebu-Mir-148  Gmo-Mir-148-P3  Loc-Mir-148-P3  Mal-Mir-148-P3  Mdo-Mir-148-P3  Mml-Mir-148-P3  Mmu-Mir-148-P3  Oan-Mir-148-P3  Ocu-Mir-148-P3  Rno-Mir-148-P3  Sha-Mir-148-P3  Spt-Mir-148-P3  Sto-Mir-148-P3  Tni-Mir-148-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Vertebrata
Genome context
(hg38)
chr17: 48037174-48037232 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGAGGCUCGGCCCGCUGUCCCCCCCGGCCCAGGUUCUGUGAUACACUCCGACUCGGGCUCUGGAGCAGUCAGUGCAUGACAGAACUUGGGCCCGGAAGGACCUUCUGCACCCAACGGGC
Get precursor sequence
Structure
        10          20        30        40        50          
GGAGGCUCGGCCCGCUG--|  CC  C              G  A    CC    CGGGCU 
                   UCC  CC GGCCCAGGUUCUGU AU CACU  GACU      \
                   AGG  GG CCGGGUUCAAGACA UA GUGA  CUGA      C
CGGGCAACCCACGUCUUCC^  AA  C              G  C    --    CGAGGU 
       110       100        90        80          70
Deep sequencing
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CommentThere is a second Drosha cut -1 on both arms.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 1- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 2- 3- 3- 3- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 4- 5- 5- 5- 5- 5- 5- 5- 6- 6- 6- 6- 6-
Star sequence

Hsa-Mir-148-P3_5p*

mirBase accessionMIMAT0026479
Sequence
0- AGGUUCUGUGAUACACUCCGACU -23
Get sequence
Proposed targets TargetScanVert: hsa-miR-152-5p
miRDB: MIMAT0026479
Mature sequence

Hsa-Mir-148-P3_3p

mirBase accessionMIMAT0000438
Sequence
38- UCAGUGCAUGACAGAACUUGG -59
Get sequence
Proposed targets microrna.org: MIMAT0000438
TargetScanVert: hsa-miR-152-3p
miRDB: MIMAT0000438