MirGeneDB 3.0
MirGeneDB ID

Pma-Mir-190-o2

Family name MIR-190 (all species)
Seed GAUAUGU
Species Sea Lamprey (Petromyzon marinus)
MiRBase ID pma-mir-190b
Paralogues Pma-Mir-190-o1  Pma-Mir-190-o3 
Orthologues Aae-Mir-190  Aga-Mir-190  Agr-Mir-190  Asu-Mir-190  Bfl-Mir-190  Bge-Mir-190  Bko-Mir-190  Bla-Mir-190  Bpl-Mir-190  Cbr-Mir-190  Cel-Mir-190  Cte-Mir-190  Dan-Mir-190  Dlo-Mir-190  Dma-Mir-190  Dme-Mir-190  Dmo-Mir-190  Dpu-Mir-190  Dsi-Mir-190  Dya-Mir-190  Eba-Mir-190  Egr-Mir-190  Esc-Mir-190  Gpa-Mir-190  Gsa-Mir-190  Hme-Mir-190  Hmi-Mir-190  Hru-Mir-190  Isc-Mir-190  Mgi-Mir-190  Mom-Mir-190  Npo-Mir-190  Obi-Mir-190  Ofu-Mir-190  Ovu-Mir-190  Pau-Mir-190  Pca-Mir-190  Pdu-Mir-190  Pfl-Mir-190  Pmi-Mir-190  Pve-Mir-190  Rph-Mir-190  Sko-Mir-190  Sma-Mir-190  Snu-Mir-190  Tca-Mir-190  Tur-Mir-190  War-Mir-190  Xbo-Mir-190 
Node of Origin (locus) P. marinus
Node of Origin (family) Bilateria
Genome context
(GCF_010993605.1_kPetMar1.pri_genomic)		 NC_046081.1: 12047776-12047834 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACGAAGAUAUCCCUCUUGCAAGCCACUGUCUGAUAUGUUUGGUAUAAGGUUGUUUCAGUAACAAUCAACUGUAUAUCAAACAUAUGGUCACAGUAGCUUGCUCAUGCUUCAAGGUAGCU
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Structure
        10         20          30        40        50         
ACGAAGAUAUCCCUCUU-      C     --| G              A     UUUCAG 
                  GCAAGC ACUGU  CU AUAUGUUUGGUAUA GGUUG      \
                  CGUUCG UGACA  GG UAUACAAACUAUAU UCAAC      U
UCGAUGGAACUUCGUACU      A     CU^ -              G     UAACAA 
       110       100        90         80        70        60
Deep sequencing
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3' NTU Unknown
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Br Gi Gu He Ki La Li Mo Mu Sk
Mature sequence

Pma-Mir-190-o2_5p
mirBase accessionMIMAT0019495
Sequence 
0- UGAUAUGUUUGGUAUAAGGUUG -22
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Star sequence

Pma-Mir-190-o2_3p*
mirBase accessionMIMAT0019496
Sequence 
37- ACUGUAUAUCAAACAUAUGGUC -59
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