MirGeneDB 3.0

MirGeneDB ID

Sha-Novel-10-P1a-v2

Family name SHA-NOVEL-10 (all species)
Seed UGAGGUU
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Novel-10-P1a-v1  Sha-Novel-10-P1b-v1  Sha-Novel-10-P1b-v2  Sha-Novel-10-P2a-v1  Sha-Novel-10-P2a-v2  Sha-Novel-10-P2b-v1  Sha-Novel-10-P2b-v2  Sha-Novel-10-P3  Sha-Novel-10-P4  Sha-Novel-10-P5-v1  Sha-Novel-10-P5-v2 
Orthologues
Node of Origin (locus) S. harrisii
Node of Origin (family) S. harrisii
Genome context
(DEVIL_add)
Precursor
(pre-Mir +30nt flank)
UUGAGGUUUGAGCUACUGGCUACUUAUUUCUCUUGGUAGCCAGCAGCCAAACCUCAGU
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Structure
         10        20         
-|         A   A         UAUU 
 UUGAGGUUUG GCU CUGGCUACU    U
 GACUCCAAAC CGA GACCGAUGG    C
U^         -   C         UUCU 
       50         40        30
Deep sequencing
3' NTU No
MotifsNo
Mature sequence

Sha-Novel-10-P1a-v2_5p

mirBase accessionNone
Sequence
0- UUGAGGUUUGAGCUACUGGCUACU -24
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Star sequence

Sha-Novel-10-P1a-v2_3p*

mirBase accessionNone
Sequence
36- UAGCCAGCAGCCAAACCUCAGU -58
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