MirGeneDB ID | Sha-Novel-10-P1b-v1 |
---|---|
Family name | SHA-NOVEL-10 (all species) |
Seed | GAGGUUU |
Species | Tasmanian devil (Sarcophilus harrisii) |
MiRBase ID | |
Paralogues | Sha-Novel-10-P1a-v1 Sha-Novel-10-P1a-v2 Sha-Novel-10-P1b-v2 Sha-Novel-10-P2a-v1 Sha-Novel-10-P2a-v2 Sha-Novel-10-P2b-v1 Sha-Novel-10-P2b-v2 Sha-Novel-10-P3 Sha-Novel-10-P4 Sha-Novel-10-P5-v1 Sha-Novel-10-P5-v2 |
Orthologues | |
Node of Origin (locus) | S. harrisii |
Node of Origin (family) | S. harrisii |
Genome context (DEVIL_add) |
|
Precursor (pre-Mir +30nt flank) | UGAGGUUUGAGCUACUGGCUACUUAUUUCUCUUGGUAGCCAGCAGCCAAACCUCAGGet precursor sequence |
Structure | 10 20 -| A A UAUU UGAGGUUUG GCU CUGGCUACU U ACUCCAAAC CGA GACCGAUGG C G^ - C UUCU 50 40 30 |
Deep sequencing | |
3' NTU | No |
Motifs | No |
Mature sequence | Sha-Novel-10-P1b-v1_5p |
mirBase accession | None |
Sequence |
0- UGAGGUUUGAGCUACUGGCUACU -23
Get sequence
|
Star sequence | Sha-Novel-10-P1b-v1_3p* |
mirBase accession | None |
Sequence |
35- UAGCCAGCAGCCAAACCUCAG -56
Get sequence
|