MirGeneDB 3.0

MirGeneDB ID

Sha-Novel-10-P2a-v1

Family name SHA-NOVEL-10 (all species)
Seed GAGGUUU
Species Tasmanian devil (Sarcophilus harrisii)
MiRBase ID
Paralogues Sha-Novel-10-P1a-v1  Sha-Novel-10-P1a-v2  Sha-Novel-10-P1b-v1  Sha-Novel-10-P1b-v2  Sha-Novel-10-P2a-v2  Sha-Novel-10-P2b-v1  Sha-Novel-10-P2b-v2  Sha-Novel-10-P3  Sha-Novel-10-P4  Sha-Novel-10-P5-v1  Sha-Novel-10-P5-v2 
Orthologues
Node of Origin (locus) S. harrisii
Node of Origin (family) S. harrisii
Genome context
(DEVIL_add)
Precursor
(pre-Mir +30nt flank)
UGAGGUUUGAGCUACUGGCUACUUAUUUCUCUUGGUAGCCAGCAGCCAAACCUUUAG
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Structure
          10        20        
U--|       A   A         UAUU 
   GAGGUUUG GCU CUGGCUACU    U
   UUCCAAAC CGA GACCGAUGG    C
GAU^       -   C         UUCU 
      50         40        30
Deep sequencing
3' NTU No
MotifsNo
Mature sequence

Sha-Novel-10-P2a-v1_5p

mirBase accessionNone
Sequence
0- UGAGGUUUGAGCUACUGGCUACU -23
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Star sequence

Sha-Novel-10-P2a-v1_3p*

mirBase accessionNone
Sequence
35- UAGCCAGCAGCCAAACCUUUAG -57
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