MirGeneDB 3.0
MirGeneDB ID

Sro-Mir-190-P30

Family name MIR-190 (all species)
Seed GAUAUGU
Species Roscoff worm (Symsagittifera roscoffensis)
MiRBase ID
Paralogues Sro-Mir-190-P28  Sro-Mir-190-P29  Sro-Mir-190-P31 
Orthologues Aae-Mir-190  Aga-Mir-190  Agr-Mir-190  Asu-Mir-190  Bfl-Mir-190  Bge-Mir-190  Bko-Mir-190  Bla-Mir-190  Bpl-Mir-190  Cbr-Mir-190  Cel-Mir-190  Cte-Mir-190  Dan-Mir-190  Dlo-Mir-190  Dma-Mir-190  Dme-Mir-190  Dmo-Mir-190  Dpu-Mir-190  Dsi-Mir-190  Dya-Mir-190  Eba-Mir-190  Egr-Mir-190  Esc-Mir-190  Gpa-Mir-190  Gsa-Mir-190  Hme-Mir-190  Hmi-Mir-190  Hru-Mir-190  Isc-Mir-190  Mgi-Mir-190  Mom-Mir-190  Npo-Mir-190  Obi-Mir-190  Ofu-Mir-190  Ovu-Mir-190  Pau-Mir-190  Pca-Mir-190  Pdu-Mir-190  Pfl-Mir-190  Pmi-Mir-190  Pve-Mir-190  Rph-Mir-190  Sko-Mir-190  Sma-Mir-190  Snu-Mir-190  Tca-Mir-190  Tur-Mir-190  War-Mir-190  Xbo-Mir-190 
Node of Origin (locus) S. roscoffensis
Node of Origin (family) Bilateria
Genome context
(GCA_025153585.1_SymRos_1_5_genomic)		 JANVAR010000665.1: 1781371-1781438 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUUCGCUUCCUCGAUCGCAUUUUGAGCUUGUGAUAUGUACUUAUAAGGGUUGUGAGUAAAAUAUUUUCAAAAAUCAACCCUUUUUCGUGCAUAUUUCUGCCUAUAGUGCACGAUAACUCUUCGUCAGU
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Structure
        10           20        30        40        50        60   
UUUCGCUUCCUCGAUCG---|   U  A  UUGU         UUAU        UGAGUAAAAU 
                    CAUU UG GC    GAUAUGUAC    AAGGGUUG          A
                    GUGA AU CG    UUAUACGUG    UUCCCAAC          U
UGACUGCUUCUCAAUAGCAC^   U  C  UCU-         CUUU        UAAAAACUUU 
      120       110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Po
Mature sequence

Sro-Mir-190-P30_5p
mirBase accessionNone
Sequence 
0- UGAUAUGUACUUAUAAGGGUUG -22
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Star sequence

Sro-Mir-190-P30_3p*
mirBase accessionNone
Sequence 
46- ACCCUUUUUCGUGCAUAUUUCU -68
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