MirGeneDB 3.0

MirGeneDB ID

Tca-Mir-137-v1

Family name MIR-137 (all species)
Seed UAUUGCU
Species Red flour beetle (Tribolium castaneum)
MiRBase ID tca-mir-137
Paralogues Tca-Mir-137-v2 
Orthologues Aga-Mir-137  Agr-Mir-137  Asu-Mir-137  Ava-Mir-137  Bfl-Mir-137  Bko-Mir-137  Bpl-Mir-137  Cbr-Mir-137  Cel-Mir-137  Cte-Mir-137  Dan-Mir-137  Dgr-Mir-137  Dma-Mir-137  Dme-Mir-137  Dmo-Mir-137  Dpu-Mir-137  Dsi-Mir-137  Dya-Mir-137  Eba-Mir-137  Ebu-Mir-137  Esc-Mir-137  Gpa-Mir-137  Hme-Mir-137  Hru-Mir-137  Isc-Mir-137  Lan-Mir-137  Lgi-Mir-137  Lhy-Mir-137  Llo-Mir-137  Mgi-Mir-137  Mom-Mir-137  Obi-Mir-137  Ofu-Mir-137  Ovu-Mir-137-v1  Pau-Mir-137  Pca-Mir-137  Pdu-Mir-137  Pfl-Mir-137-v1  Pmi-Mir-137-v1  Pve-Mir-137  Rph-Mir-137  Sko-Mir-137  Snu-Mir-137  Spu-Mir-137  Tur-Mir-137  War-Mir-137  Xbo-Mir-137 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(Tcas5.2)
LG7: 3734620-3734680 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-137-v1)
Mir-137-v1 LG7: 3734620-3734680 [+] Ensembl
Mir-137-v2 LG7: 3734620-3734680 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
ACACACGAGGAAAUGGUAACUUGGUUGGUCACGUGUAUUCUUGGGUAAUUAACACAUAUUCAGGGAUGUUAUUGCUUGAGAAUACACGUAGCUGACAAGUGACAACAGCAUCGACAGCGCU
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Structure
        10           20        30        40        50          
ACACACGAGGAAAUGGUA---|    G UG UC           UG      UAACACAUAU 
                     ACUUG U  G  ACGUGUAUUCU  GGUAAU          \
                     UGAAC A  C  UGCACAUAAGA  UCGUUA          U
UCGCGACAGCUACGACAACAG^    - GU GA           GU      UUGUAGGGAC 
 .       110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ad Ea Em Em Em Em Em Fe Fe Fe Fe Oo
Star sequence

Tca-Mir-137-v1_5p*

mirBase accessionMIMAT0019117
Sequence
0- ACGUGUAUUCUUGGGUAAUUAA -22
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Mature sequence

Tca-Mir-137-v1_3p

mirBase accessionMIMAT0008373
Sequence
38- UUAUUGCUUGAGAAUACACGUAG -61
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