MirGeneDB 3.0
MirGeneDB ID

Tca-Mir-3851-P1

Family name MIR-3851 (all species)
Seed AGUACGG
Species Red flour beetle (Tribolium castaneum)
MiRBase ID tca-mir-3851h
Paralogues Tca-Mir-3851-P2  Tca-Mir-3851-P3  Tca-Mir-3851-P4a  Tca-Mir-3851-P4b  Tca-Mir-3851-P4c  Tca-Mir-3851-P4d  Tca-Mir-3851-P5a  Tca-Mir-3851-P5b  Tca-Mir-3851-P6  Tca-Mir-3851-P7  Tca-Mir-3851-P8a  Tca-Mir-3851-P8b  Tca-Mir-3851-P9a  Tca-Mir-3851-P9b 
Orthologues
Node of Origin (locus) T. castaneum
Node of Origin (family) T. castaneum
Genome context
(Tcas5.2)		 LG6: 9956963-9957020 [-] Ensembl
Clustered miRNAs
(< 50kb from Mir-3851-P1)		 Mir-3851-P1 LG6: 9956963-9957020 [-] Ensembl
Mir-11624-P5 LG6: 9958318-9958377 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CAAAAAUUAAACCAAUUAAAUUUAAUAUUGAGUGGACAUGGGUGGUACUGUGUAAUUUUUGACUCAUAGUACGGUCCAUGUUGGCUCAGUAAUAAAUUACAUUUCUACAAUUGCAACA
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Structure
        10          20        30        40        50        
CAAAAAUUAAACCAAUUA--|     A        G         G        UAAUU 
                    AAUUUA UAUUGAGU GACAUGGGU GUACUGUG     U
                    UUAAAU AUGACUCG UUGUACCUG CAUGAUAC     U
ACAACGUUAACAUCUUUACA^     A        G         G        UCAGU 
      110       100        90        80        70        60
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ad Ea Em Em Em Em Em Fe Fe Fe Fe Oo
Star sequence

Tca-Mir-3851-P1_5p*
mirBase accessionMIMAT0045530
Sequence 
0- AGUGGACAUGGGUGGUACUGUG -22
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Mature sequence

Tca-Mir-3851-P1_3p
mirBase accessionMIMAT0045531
Sequence 
36- UAGUACGGUCCAUGUUGGCUCA -58
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