Mir-210-P22

MirGeneDB ID

Tur-Mir-210-P22

Family name

MIR-210 (all species)

Seed

UGUGCGU

Species

Two-spotted spider mite (Tetranychus urticae)

MiRBase ID

Paralogues

Tur-Mir-210-P21

Orthologues

Aca-Mir-210 Agr-Mir-210 Ami-Mir-210 Bfl-Mir-210 Bla-Mir-210 Bta-Mir-210 Cfa-Mir-210 Cja-Mir-210 Cli-Mir-210 Cmi-Mir-210 Cpi-Mir-210 Cpo-Mir-210 Dgr-Mir-210 Dma-Mir-210 Dno-Mir-210 Dpu-Mir-210 Dre-Mir-210 Eba-Mir-210 Ebu-Mir-210 Eca-Mir-210 Egr-Mir-210 Ete-Mir-210 Gga-Mir-210 Gja-Mir-210 Gmo-Mir-210 Hsa-Mir-210 Isc-Mir-210 Lan-Mir-210 Lch-Mir-210 Lgi-Mir-210 Lhy-Mir-210 Llo-Mir-210 Loc-Mir-210 Mal-Mir-210 Mdo-Mir-210 Mgi-Mir-210 Mml-Mir-210 Mmr-Mir-210 Mmu-Mir-210 Mom-Mir-210 Mun-Mir-210 Neu-Mir-210 Npo-Mir-210 Oan-Mir-210 Ocu-Mir-210 Ofu-Mir-210 Pab-Mir-210 Pau-Mir-210 Pbv-Mir-210 Pca-Mir-210 Pma-Mir-210 Rno-Mir-210 Sha-Mir-210 Sko-Mir-210 Sma-Mir-210 Snu-Mir-210 Spt-Mir-210 Tgu-Mir-210 Tni-Mir-210 War-Mir-210 Xla-Mir-210-P22 Xtr-Mir-210

Node of Origin (locus)

T. urticae

Node of Origin (family)

Bilateria

Genome context
(GCA_000239435.1_ASM23943v1_genomic_TUR_traces)

HE587323.1: 74280-74348 [-] Ensembl

Precursor
(pre-Mir +30nt flank)

GAAUUGAGCAAAUUAUUGAAAUGAUCUGUUAGUUGUUUGACCACGACACAAGGUUGCAUUUAAAAUCUUUUUAUCUUUGUGCGUGUUUCAAGCGGCUGUUGGUUCAUUUUAACCAUCAACAUUGCCUUC

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Structure

        10          20        30        40         50        60    
GAAUUGAGCAAAUUAUU--       U  GU           C-|   A       UUGCAUUUAA 
                   GAAAUGA CU  UAGUUGUUUGA  CACG CACAAGG          \
                   UUUUACU GG  GUCGGCGAACU  GUGC GUGUUUC          A
CUUCCGUUACAACUACCAA       U  UU           UU^   -       UAUUUUUCUA 
       120       110       100        90         80        70

Deep sequencing

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3' NTU

Motifs

UG at 5p(-14), CNNC at 3p(+17)

Tissue expression

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Star sequence

Tur-Mir-210-P22_5p*

mirBase accession

None

Sequence

0- AGUUGUUUGACCACGACACAAGG -23

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Mature sequence

Tur-Mir-210-P22_3p

mirBase accession

None

Sequence

46- UUGUGCGUGUUUCAAGCGGCUGU -69

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