MirGeneDB 3.0

MirGeneDB ID

Tur-Mir-92-P22

Family name MIR-92 (all species)
Seed AUUGCAC
Species Two-spotted spider mite (Tetranychus urticae)
MiRBase ID
Paralogues Tur-Mir-92-P21  Tur-Mir-92-P23 
Orthologues Asu-Mir-92  Cel-Mir-92  Esc-Mir-92  Gsp-Mir-92  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Pmi-Mir-92-o22  Sme-Mir-92 
Node of Origin (locus) T. urticae
Node of Origin (family) Bilateria
Genome context
(GCA_000239435.1_ASM23943v1_genomic_TUR_traces)
HE587304.1: 3805132-3805205 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UUUCAAAUUCUGACUGGCUGAUACUGUAGCAGGCCUGGAGUGGUGUCAAUAUAUUGUUACUUGUCUAACCCUAUUUGGACUAUAUUGCACUAGUCCCGGCCUGUCAUGGUUCAUUUUAUGUUCAUCUGUACAUU
Get precursor sequence
Structure
        10           20        30        40        50        60       
UUUCAAAUUCUGACUGGC---|  U     AG      U   G     U       UUGUUACUUGUCU 
                     UGA ACUGU  CAGGCC GGA UGGUG CAAUAUA             \
                     ACU UGGUA  GUCCGG CCU AUCAC GUUAUAU             A
UUACAUGUCUACUUGUAUUUU^  -     CU      C   G     -       CAGGUUUAUCCCA 
  130       120        110       100        90         80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
 +
Ad Ad Ad Ad Ad Em To
Star sequence

Tur-Mir-92-P22_5p*

mirBase accessionNone
Sequence
0- AGGCCUGGAGUGGUGUCAAUAUA -23
Get sequence
Mature sequence

Tur-Mir-92-P22_3p

mirBase accessionNone
Sequence
52- UAUUGCACUAGUCCCGGCCUGU -74
Get sequence