| MirGeneDB ID | Tur-Mir-92-P22 |
|---|
| Family name |
MIR-92 (all species) |
|---|
| Seed |
AUUGCAC |
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| Species |
Two-spotted spider mite (Tetranychus urticae) |
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| MiRBase ID |
|
|---|
| Paralogues |
Tur-Mir-92-P21
Tur-Mir-92-P23
|
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| Orthologues |
Asu-Mir-92
Cel-Mir-92
Esc-Mir-92
Gsp-Mir-92
Hmi-Mir-92
Isc-Mir-92
Obi-Mir-92
Pmi-Mir-92-o22
Sme-Mir-92
|
|---|
| Node of Origin (locus) |
T. urticae
|
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| Node of Origin (family) |
Bilateria
|
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Genome context
(GCA_000239435.1_ASM23943v1_genomic_TUR_traces) |
HE587304.1: 3805132-3805205 [-]
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
UUUCAAAUUCUGACUGGCUGAUACUGUAGCAGGCCUGGAGUGGUGUCAAUAUAUUGUUACUUGUCUAACCCUAUUUGGACUAUAUUGCACUAGUCCCGGCCUGUCAUGGUUCAUUUUAUGUUCAUCUGUACAUU
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UUUCAAAUUCUGACUGGC---| U AG U G U UUGUUACUUGUCU
UGA ACUGU CAGGCC GGA UGGUG CAAUAUA \
ACU UGGUA GUCCGG CCU AUCAC GUUAUAU A
UUACAUGUCUACUUGUAUUUU^ - CU C G - CAGGUUUAUCCCA
130 120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | No |
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Tissue expression
|
|
|---|
| Star sequence |
Tur-Mir-92-P22_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGGCCUGGAGUGGUGUCAAUAUA -23
Get sequence
|
|---|
| Mature sequence |
Tur-Mir-92-P22_3p |
| mirBase accession | None |
|---|
| Sequence |
52- UAUUGCACUAGUCCCGGCCUGU -74
Get sequence
|
|---|
