MirGeneDB 3.0

MirGeneDB ID

Tur-Mir-92-P21

Family name MIR-92 (all species)
Seed AUUGCAC
Species Two-spotted spider mite (Tetranychus urticae)
MiRBase ID
Paralogues Tur-Mir-92-P22  Tur-Mir-92-P23 
Orthologues Asu-Mir-92  Cel-Mir-92  Esc-Mir-92  Gsp-Mir-92  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Pmi-Mir-92-o21  Sme-Mir-92 
Node of Origin (locus) T. urticae
Node of Origin (family) Bilateria
Genome context
(GCA_000239435.1_ASM23943v1_genomic_TUR_traces)
HE587307.1: 1360151-1360224 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CUCUAACUGAUGGUCUGCCUAGCCUGUGGUAGGUCAUGAGUAGUGUCAAUAUAAUGUCAAUAGACAAGUUAAAUUAGAACUAUAUUGCACUAUUCCCGGCCUAUCAAUGGUGUAACAUAUAAAGAGUUUCGCUG
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Structure
        10        20          30        40        50        60       
CUCUAACUGAUGGUCUGCCUA--|  UG         AU        U       AUGUCAAUAGACA 
                       GCC  UGGUAGGUC  GAGUAGUG CAAUAUA             \
                       UGG  ACUAUCCGG  CUUAUCAC GUUAUAU             A
GUCGCUUUGAGAAAUAUACAAUG^  UA         CC        -       CAAGAUUAAAUUG 
  130       120       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
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Star sequence

Tur-Mir-92-P21_5p*

mirBase accessionNone
Sequence
0- AGGUCAUGAGUAGUGUCAAUAUA -23
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Mature sequence

Tur-Mir-92-P21_3p

mirBase accessionNone
Sequence
52- UAUUGCACUAUUCCCGGCCUAU -74
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