| MirGeneDB ID | Tur-Mir-92-P21 |
|---|
| Family name |
MIR-92 (all species) |
|---|
| Seed |
AUUGCAC |
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| Species |
Two-spotted spider mite (Tetranychus urticae) |
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| MiRBase ID |
|
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| Paralogues |
Tur-Mir-92-P22
Tur-Mir-92-P23
|
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| Orthologues |
Asu-Mir-92
Cel-Mir-92
Esc-Mir-92
Gsp-Mir-92
Hmi-Mir-92
Isc-Mir-92
Obi-Mir-92
Pmi-Mir-92-o21
Sme-Mir-92
|
|---|
| Node of Origin (locus) |
T. urticae
|
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| Node of Origin (family) |
Bilateria
|
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Genome context
(GCA_000239435.1_ASM23943v1_genomic_TUR_traces) |
HE587307.1: 1360151-1360224 [+]
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
CUCUAACUGAUGGUCUGCCUAGCCUGUGGUAGGUCAUGAGUAGUGUCAAUAUAAUGUCAAUAGACAAGUUAAAUUAGAACUAUAUUGCACUAUUCCCGGCCUAUCAAUGGUGUAACAUAUAAAGAGUUUCGCUG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CUCUAACUGAUGGUCUGCCUA--| UG AU U AUGUCAAUAGACA
GCC UGGUAGGUC GAGUAGUG CAAUAUA \
UGG ACUAUCCGG CUUAUCAC GUUAUAU A
GUCGCUUUGAGAAAUAUACAAUG^ UA CC - CAAGAUUAAAUUG
130 120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
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| Motifs | No |
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Tissue expression
|
|
|---|
| Star sequence |
Tur-Mir-92-P21_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- AGGUCAUGAGUAGUGUCAAUAUA -23
Get sequence
|
|---|
| Mature sequence |
Tur-Mir-92-P21_3p |
| mirBase accession | None |
|---|
| Sequence |
52- UAUUGCACUAUUCCCGGCCUAU -74
Get sequence
|
|---|
