MirGeneDB 3.0

MirGeneDB ID

Tur-Mir-92-P23

Family name MIR-92 (all species)
Seed AUUGCAC
Species Two-spotted spider mite (Tetranychus urticae)
MiRBase ID tur-mir-92
Paralogues Tur-Mir-92-P21  Tur-Mir-92-P22 
Orthologues Asu-Mir-92  Cel-Mir-92  Esc-Mir-92  Gsp-Mir-92  Hmi-Mir-92  Isc-Mir-92  Obi-Mir-92  Pmi-Mir-92-o23  Sme-Mir-92 
Node of Origin (locus) T. urticae
Node of Origin (family) Bilateria
Genome context
(GCA_000239435.1_ASM23943v1_genomic_TUR_traces)
HE587317.1: 1593042-1593106 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UUACUGUCCAUUGGAAUCUCAUACUGAAACAGGCCUAGACUGGUGUCAAUAUUUCAUAUUUUGAUUAUCAUCAUAUUGCACUCGUCCCGGCCUGUUACGGUAUUUAAUCGUGUUUUUAGUGCUCG
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Structure
        10        20          30        40        50        60  
UUACUGUCCAUUGGAAUCUC--|     A        UA   U    U      UUCAUAUUU 
                      AUACUG AACAGGCC  GAC GGUG CAAUAU         U
                      UAUGGC UUGUCCGG  CUG UCAC GUUAUA         G
GCUCGUGAUUUUUGUGCUAAUU^     A        CC   C    -      CUACUAUUA 
   120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
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Star sequence

Tur-Mir-92-P23_5p*

mirBase accessionMIMAT0023086
Sequence
0- AGGCCUAGACUGGUGUCAAUAUU -23
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Mature sequence

Tur-Mir-92-P23_3p

mirBase accessionMIMAT0023087
Sequence
43- UAUUGCACUCGUCCCGGCCUGU -65
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