MirGeneDB 3.0
MirGeneDB ID

Xla-Mir-153-P1c

Family name MIR-153 (all species)
Seed UGCAUAG
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-153-P1d  Xla-Mir-153-P2c  Xla-Mir-153-P2d 
Orthologues Aca-Mir-153-P1  Agr-Mir-153  Ami-Mir-153-P1  Asu-Mir-153  Bfl-Mir-153  Bko-Mir-153  Bla-Mir-153  Bpl-Mir-153  Bta-Mir-153-P1  Cfa-Mir-153-P1  Cin-Mir-153  Cja-Mir-153-P1  Cli-Mir-153-P1  Cmi-Mir-153-P1  Cpi-Mir-153-P1  Cpo-Mir-153-P1  Cte-Mir-153  Dgr-Mir-153  Dma-Mir-153  Dno-Mir-153-P1  Dpu-Mir-153  Eba-Mir-153  Eca-Mir-153-P1  Egr-Mir-153  Ete-Mir-153-P1  Gga-Mir-153-P1  Gja-Mir-153-P1  Gsa-Mir-153  Gsp-Mir-153  Hmi-Mir-153  Hru-Mir-153  Hsa-Mir-153-P1  Isc-Mir-153  Laf-Mir-153-P1  Lan-Mir-153  Lch-Mir-153-P1  Lgi-Mir-153  Llo-Mir-153  Loc-Mir-153-P1  Mdo-Mir-153-P1  Mgi-Mir-153  Mml-Mir-153-P1  Mmr-Mir-153-P1  Mmu-Mir-153-P1  Mom-Mir-153  Mun-Mir-153-P1  Npo-Mir-153  Oan-Mir-153-P1  Obi-Mir-153  Ocu-Mir-153-P1  Ofu-Mir-153  Ovu-Mir-153  Pab-Mir-153-P1  Pau-Mir-153  Pbv-Mir-153-P1  Pca-Mir-153  Pcr-Mir-153  Pdu-Mir-153  Pfl-Mir-153  Pma-Mir-153-o1  Pmi-Mir-153  Pve-Mir-153  Rno-Mir-153-P1  Rph-Mir-153  Sha-Mir-153-P1  Sko-Mir-153  Sme-Mir-153  Snu-Mir-153  Spt-Mir-153-P1  Spu-Mir-153  Sto-Mir-153-P1  Tgu-Mir-153-P1  Tur-Mir-153  War-Mir-153  Xbo-Mir-153  Xtr-Mir-153-P1 
Node of Origin (locus) X. laevis
Node of Origin (family) Bilateria
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030734.1: 14000822-14000881 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUUUUGCCAGCUAAUUAGCAGUUGCCAGUGUCAUUUUUGUGACGUUGCAGCUAGUAAUAUGAGCCCAGUUGCAUAGUCACAAAAGUGAUUAUUGGAAACUGUCACACCUCUGCGGGGGAC
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Structure
        10         20         30        40        50         
UUUUUGCCAGCUAAUUA-      G     -|             GU       AGUAAU 
                  GCAGUU CCAGU GUCAUUUUUGUGAC  UGCAGCU      A
                  UGUCAA GGUUA UAGUGAAAACACUG  ACGUUGA      U
CAGGGGGCGUCUCCACAC      A     U^             AU       CCCGAG 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Eg Em Em He Ki Re St St
Star sequence

Xla-Mir-153-P1c_5p* (predicted)
mirBase accessionNone
Sequence 
0- UCAUUUUUGUGACGUUGCAGCU -22
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Mature sequence

Xla-Mir-153-P1c_3p
mirBase accessionNone
Sequence 
38- UUGCAUAGUCACAAAAGUGAUU -60
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