MirGeneDB ID | Bta-Mir-153-P1 |
Family name |
MIR-153 (all species) |
Seed |
UGCAUAG |
Species |
Cow (Bos taurus) |
MiRBase ID |
bta-mir-153-2
|
Paralogues |
Bta-Mir-153-P2
|
Orthologues |
Aca-Mir-153-P1
Ami-Mir-153-P1
Asu-Mir-153
Bfl-Mir-153
Bla-Mir-153
Bpl-Mir-153
Cfa-Mir-153-P1
Cgi-Mir-153
Cin-Mir-153
Cli-Mir-153-P1
Cmi-Mir-153-P1
Cpi-Mir-153-P1
Cpo-Mir-153-P1
Cte-Mir-153
Dma-Mir-153
Dno-Mir-153-P1
Dpu-Mir-153
Dre-Mir-153-P1a
Ete-Mir-153-P1
Gga-Mir-153-P1
Gja-Mir-153-P1
Gmo-Mir-153-P1a
Gmo-Mir-153-P1b
Hsa-Mir-153-P1
Isc-Mir-153
Lan-Mir-153
Lch-Mir-153-P1
Lgi-Mir-153
Loc-Mir-153-P1
Mal-Mir-153-P1a
Mal-Mir-153-P1b
Mdo-Mir-153-P1
Mml-Mir-153-P1
Mmu-Mir-153-P1
Mun-Mir-153-P1
Npo-Mir-153
Oan-Mir-153-P1
Obi-Mir-153
Ocu-Mir-153-P1
Ovu-Mir-153
Pbv-Mir-153-P1
Pfl-Mir-153
Pma-Mir-153-o1
Pmi-Mir-153
Rno-Mir-153-P1
Sha-Mir-153-P1
Sko-Mir-153
Sme-Mir-153
Spt-Mir-153-P1
Spu-Mir-153
Sto-Mir-153-P1
Tgu-Mir-153-P1
Tni-Mir-153-P1b
Xbo-Mir-153
Xla-Mir-153-P1c
Xla-Mir-153-P1d
Xtr-Mir-153-P1
|
Node of Origin (locus) |
Gnathostomata
|
Node of Origin (family) |
Bilateria
|
Genome context (GCF_002263795.1_ARS-UCD1.2_BTA) |
NC_037331.1: 118753595-118753655 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UACUUUGCCAGCUAAUUAGCGGUGGCCAGUGUCAUUUUUGUGAUGUUGCAGCUAGUAAUAUGAGCCCAGUUGCAUAGUCACAAAAGUGAUCAUUGGAAACUGUGACUGUACUGCAGGGACA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
UACUUUGCCAGCUAAUUA GG -| GU AGUAAU
GCGGU CCAGUG UCAUUUUUGUGAU UGCAGCU A
UGUCA GGUUAC AGUGAAAACACUG ACGUUGA U
ACAGGGACGUCAUGUCAG AA U^ AU CCCGAG
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
Ad |
Cd |
Fe |
Bo |
Br |
Ce |
Co |
Co |
De |
He |
Hy |
Ir |
Ki |
La |
Lo |
No |
Op |
Or |
Pe |
Re |
Su |
Te |
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Star sequence |
Bta-Mir-153-P1_5p* |
mirBase accession | None |
Sequence |
0- GUCAUUUUUGUGAUGUUGCAGCU -23
Get sequence
|
Mature sequence |
Bta-Mir-153-P1_3p |
mirBase accession | MIMAT0009239 |
Sequence |
39- UUGCAUAGUCACAAAAGUGAUC -61
Get sequence
|
Proposed targets |
TargetScanVert: bta-miR-153
|