MirGeneDB 3.0
MirGeneDB ID

Mal-Mir-153-P1b

Family name MIR-153 (all species)
Seed UGCAUAG
Species Asian swamp eel (Monopterus albus)
MiRBase ID
Paralogues Mal-Mir-153-P1a  Mal-Mir-153-P2a  Mal-Mir-153-P2b 
Orthologues Aca-Mir-153-P1  Agr-Mir-153  Ami-Mir-153-P1  Asu-Mir-153  Bfl-Mir-153  Bko-Mir-153  Bla-Mir-153  Bpl-Mir-153  Bta-Mir-153-P1  Cfa-Mir-153-P1  Cin-Mir-153  Cja-Mir-153-P1  Cli-Mir-153-P1  Cmi-Mir-153-P1  Cpi-Mir-153-P1  Cpo-Mir-153-P1  Cte-Mir-153  Dgr-Mir-153  Dma-Mir-153  Dno-Mir-153-P1  Dpu-Mir-153  Eba-Mir-153  Eca-Mir-153-P1  Egr-Mir-153  Ete-Mir-153-P1  Gga-Mir-153-P1  Gja-Mir-153-P1  Gmo-Mir-153-P1b  Gsa-Mir-153  Gsp-Mir-153  Hmi-Mir-153  Hru-Mir-153  Hsa-Mir-153-P1  Isc-Mir-153  Laf-Mir-153-P1  Lan-Mir-153  Lch-Mir-153-P1  Lgi-Mir-153  Llo-Mir-153  Loc-Mir-153-P1  Mdo-Mir-153-P1  Mgi-Mir-153  Mml-Mir-153-P1  Mmr-Mir-153-P1  Mmu-Mir-153-P1  Mom-Mir-153  Mun-Mir-153-P1  Npo-Mir-153  Oan-Mir-153-P1  Obi-Mir-153  Ocu-Mir-153-P1  Ofu-Mir-153  Ovu-Mir-153  Pab-Mir-153-P1  Pau-Mir-153  Pbv-Mir-153-P1  Pca-Mir-153  Pcr-Mir-153  Pdu-Mir-153  Pfl-Mir-153  Pma-Mir-153-o1  Pmi-Mir-153  Pve-Mir-153  Rno-Mir-153-P1  Rph-Mir-153  Sha-Mir-153-P1  Sko-Mir-153  Sme-Mir-153  Snu-Mir-153  Spt-Mir-153-P1  Spu-Mir-153  Sto-Mir-153-P1  Tgu-Mir-153-P1  Tni-Mir-153-P1b  Tur-Mir-153  War-Mir-153  Xbo-Mir-153  Xtr-Mir-153-P1 
Node of Origin (locus) Clupeocephala
Node of Origin (family) Bilateria
Genome context
(GCA_001952655.1_M_albus_1.0_genomic)		 KV884813.1: 1230911-1230970 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUUUUACCAGCUAACUAGCGGUUGCCAGUGUCAUUUUUGUGAUGUUGCAGCUAGUAAUAUAAGCCCAGUUGCAUAGUCACAAAAGUGAUCAUUGGAGACUGUGACUCUGCAACCAAAGGG
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Structure
        10         20        30         40        50         
GUUUUACCAGCUAACUA-     UG      -|            GU       AGUAAU 
                  GCGGU  CCAGUG UCAUUUUUGUGAU  UGCAGCU      A
                  UGUCA  GGUUAC AGUGAAAACACUG  ACGUUGA      U
GGGAAACCAACGUCUCAG     GA      U^            AU       CCCGAA 
.       110       100        90        80        70        60
Deep sequencing
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CommentThere is a second Drosha cut -1 and +1 on the 5p arm.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Fe Fe In Ma Ma
Star sequence

Mal-Mir-153-P1b_5p*
mirBase accessionNone
Sequence 
0- UCAUUUUUGUGAUGUUGCAGCU -22
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Mature sequence

Mal-Mir-153-P1b_3p
mirBase accessionNone
Sequence 
38- UUGCAUAGUCACAAAAGUGAUC -60
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