Mir-153-P2

MirGeneDB ID

Bta-Mir-153-P2

Family name

MIR-153 (all species)

Seed

UGCAUAG

Species

Cow (Bos taurus)

MiRBase ID

bta-mir-153-1

Paralogues

Bta-Mir-153-P1

Orthologues

Aca-Mir-153-P2 Agr-Mir-153 Ami-Mir-153-P2 Asu-Mir-153 Bfl-Mir-153 Bko-Mir-153 Bla-Mir-153 Bpl-Mir-153 Cfa-Mir-153-P2 Cin-Mir-153 Cja-Mir-153-P2 Cli-Mir-153-P2 Cmi-Mir-153-P2 Cpi-Mir-153-P2 Cte-Mir-153 Dgr-Mir-153 Dma-Mir-153 Dno-Mir-153-P2 Dpu-Mir-153 Dre-Mir-153-P2a Dre-Mir-153-P2b Eba-Mir-153 Eca-Mir-153-P2 Egr-Mir-153 Gga-Mir-153-P2 Gja-Mir-153-P2 Gmo-Mir-153-P2a Gsa-Mir-153 Gsp-Mir-153 Hmi-Mir-153 Hru-Mir-153 Hsa-Mir-153-P2 Isc-Mir-153 Laf-Mir-153-P2 Lan-Mir-153 Lch-Mir-153-P2 Lgi-Mir-153 Llo-Mir-153 Loc-Mir-153-P2 Mal-Mir-153-P2a Mal-Mir-153-P2b Mdo-Mir-153-P2 Mgi-Mir-153 Mml-Mir-153-P2 Mmr-Mir-153-P2 Mom-Mir-153 Mun-Mir-153-P2 Neu-Mir-153-P2 Npo-Mir-153 Oan-Mir-153-P2 Obi-Mir-153 Ofu-Mir-153 Ovu-Mir-153 Pab-Mir-153-P2 Pau-Mir-153 Pbv-Mir-153-P2 Pca-Mir-153 Pcr-Mir-153 Pdu-Mir-153 Pfl-Mir-153 Pma-Mir-153-o2 Pmi-Mir-153 Pve-Mir-153 Rph-Mir-153 Sha-Mir-153-P2 Sko-Mir-153 Sme-Mir-153 Snu-Mir-153 Spt-Mir-153-P2 Spu-Mir-153 Sto-Mir-153-P2 Tgu-Mir-153-P2 Tni-Mir-153-P2a Tni-Mir-153-P2b Tur-Mir-153 War-Mir-153 Xbo-Mir-153 Xla-Mir-153-P2c Xla-Mir-153-P2d Xtr-Mir-153-P2

Node of Origin (locus)

Gnathostomata

Node of Origin (family)

Bilateria

Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)

NC_037329.1: 107240966-107241025 [-] UCSC Ensembl

Precursor
(pre-Mir +30nt flank)

CUCUUCUCUCUCUCUCUCACGGCUGCCAGCGUCAUUUUUGUGAUCUGCAGCUAGUAUUCUCACUCCAGUUGCAUAGUCACAAAAGUGAUCACUGGCAGGUGUGGCCGCUGCAUGGAUGGG

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Structure

        10        20        30         40         50         
CUCUUCUCUCUCUCUCUC   G       C-              C-|      AGUAUU 
                  ACG CUGCCAG  GUCAUUUUUGUGAU  UGCAGCU      C
                  UGU GACGGUC  UAGUGAAAACACUG  ACGUUGA      U
GGGUAGGUACGUCGCCGG   G       AC              AU^      CCUCAC 
.       110       100        90        80        70        60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

Ad	Bo	Br	Ce	Co	Co	De	Fe	He	Hy	Ir	Ki	La	Lo	Mi	No	Op	Or	Pe	Re	Su	Te

Star sequence

Bta-Mir-153-P2_5p*

mirBase accession

None

Sequence

0- GUCAUUUUUGUGAUCUGCAGCU -22

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Mature sequence

Bta-Mir-153-P2_3p

mirBase accession

MIMAT0009239

Sequence

38- UUGCAUAGUCACAAAAGUGAUC -60

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Proposed targets

TargetScanVert: bta-miR-153