MirGeneDB 3.0
MirGeneDB ID

Xla-Mir-459-P2

Family name MIR-459 (all species)
Seed CAGUAAC
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-459-P1 
Orthologues Ami-Mir-459  Bta-Mir-459  Cfa-Mir-459  Cja-Mir-459  Cli-Mir-459  Cpi-Mir-459  Cpo-Mir-459  Dno-Mir-459  Dre-Mir-459  Ebu-Mir-459  Eca-Mir-459  Ete-Mir-459  Gmo-Mir-459  Hsa-Mir-459  Laf-Mir-459  Loc-Mir-459  Mal-Mir-459  Mml-Mir-459  Mmr-Mir-459  Mmu-Mir-459  Mun-Mir-459  Oan-Mir-459  Ocu-Mir-459  Pab-Mir-459  Pma-Mir-459  Rno-Mir-459  Spt-Mir-459  Sto-Mir-459  Tni-Mir-459  Xtr-Mir-459 
Node of Origin (locus) X. laevis
Node of Origin (family) Vertebrata
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030727.1: 20948137-20948197 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUCCCUAUAUGUGCUUCUGCUUUUUUGCUCUCAGUAACAACGAUUCAGCCUUGUCCUUAUUACAUAACCAAGGGGAUCUUUGUCACUAAGUGCAAUUAAUAGCAGCAUGCAACAAGCCAGC
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Structure
        10        20          30        40        50        60 
CUCCCUAUAUGUGCUUCU   UUU--|   U  C   A    C     AG     UCCUUAU 
                  GCU     UUGC CU AGU ACAA GAUUC  CCUUG       \
                  CGA     AACG GA UCA UGUU CUAGG  GGAAC       U
CGACCGAACAACGUACGA   UAAUU^   U  A   C    U     --     CAAUACA 
 .       110       100        90        80          70
Deep sequencing
3' NTU No
MotifsNo
Tissue expression
-   +
Em
Mature sequence

Xla-Mir-459-P2_5p
mirBase accessionNone
Sequence 
0- UCAGUAACAACGAUUCAGCCUUGU -24
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Star sequence

Xla-Mir-459-P2_3p*
mirBase accessionNone
Sequence 
39- AAGGGGAUCUUUGUCACUAAGU -61
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