MirGeneDB 3.0
MirGeneDB ID

Dre-Mir-459

Family name MIR-459 (all species)
Seed CAGUAAC
Species Zebrafish (Danio rerio)
MiRBase ID dre-mir-459
Paralogues
Orthologues Ami-Mir-459  Bta-Mir-459  Cfa-Mir-459  Cja-Mir-459  Cli-Mir-459  Cpi-Mir-459  Cpo-Mir-459  Dno-Mir-459  Ebu-Mir-459  Eca-Mir-459  Ete-Mir-459  Gmo-Mir-459  Hsa-Mir-459  Laf-Mir-459  Loc-Mir-459  Mal-Mir-459  Mml-Mir-459  Mmr-Mir-459  Mmu-Mir-459  Mun-Mir-459  Oan-Mir-459  Ocu-Mir-459  Pab-Mir-459  Pma-Mir-459  Rno-Mir-459  Spt-Mir-459  Sto-Mir-459  Tni-Mir-459  Xla-Mir-459-P1  Xla-Mir-459-P2  Xtr-Mir-459 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(danRer11)		 chr1: 1575493-1575555 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGAAAGGAGAAAGGUCUGACCUCUUGCUCUCAGUAACAAGGAUUCAUCCUGUUGUGGUACUCAAAUCCAACAGGGAAUCUCUGUUACUGGGGUUAAGGUUCAGAAAUUCGCUUUGCGGGGGG
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Structure
        10            20        30        40        50        60  
CUGAAAGGAGAAAGGUCU----|    CUU    U        AG     AU      GUGGUAC 
                      GACCU   GCUC CAGUAACA  GAUUC  CCUGUU       \
                      UUGGA   UGGG GUCAUUGU  CUAAG  GGACAA       U
GGGGGGCGUUUCGCUUAAAGAC^    AU-    -        CU     --      CCUAAAC 
 120       110       100          90        80          70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Br Br Em Ey Gu Gu He Li Li Ov Te
Mature sequence

Dre-Mir-459_5p
mirBase accessionMIMAT0001886
Sequence 
0- UCAGUAACAAGGAUUCAUCCUGUU -24
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Proposed targets TargetScanFish: dre-miR-459
Star sequence

Dre-Mir-459_3p*
mirBase accessionMIMAT0003408
Sequence 
41- CAGGGAAUCUCUGUUACUGGGG -63
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