MirGeneDB ID | Oan-Mir-459 |
Family name |
MIR-459 (all species) |
Seed |
CAGUAAC |
Species |
Platypus (Ornithorhynchus anatinus) |
MiRBase ID |
oan-mir-802
|
Paralogues |
|
Orthologues |
Ami-Mir-459
Bta-Mir-459
Cfa-Mir-459
Cja-Mir-459
Cli-Mir-459
Cpi-Mir-459
Cpo-Mir-459
Dno-Mir-459
Dre-Mir-459
Ebu-Mir-459
Eca-Mir-459
Ete-Mir-459
Gmo-Mir-459
Hsa-Mir-459
Laf-Mir-459
Loc-Mir-459
Mal-Mir-459
Mml-Mir-459
Mmr-Mir-459
Mmu-Mir-459
Mun-Mir-459
Ocu-Mir-459
Pab-Mir-459
Pma-Mir-459
Rno-Mir-459
Spt-Mir-459
Sto-Mir-459
Tni-Mir-459
Xla-Mir-459-P1
Xla-Mir-459-P2
Xtr-Mir-459
|
Node of Origin (locus) |
Vertebrata
|
Node of Origin (family) |
Vertebrata
|
Genome context (mOrnAna1.p.v1_plustraces) |
NC_041744.1: 21488371-21488431 [+]
|
Precursor (pre-Mir +30nt flank) |
UGCUCCUCUCCGCGUUUCUGUUUCUUGCAGUCAGUAACAAAGAUUCAUCCUUGUGUCCUGUAAGCAACAGGGAGGGUCUUUGUCACUGAGUGCAAUUAAUGGUGGCCGACAGACCAGGAAG
Get precursor sequence
|
Structure | 10 20 30 40 50 60
UGCUCCUCUCCGCGUUU--| UC G A A GUCCU
CUGUU UUGCA UCAGU ACAAAGAUUC UCCUUGU G
GGUAA AACGU AGUCA UGUUUCUGGG AGGGACA U
GAAGGACCAGACAGCCGGU^ UU G C - ACGAA
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Oan-Mir-459_5p |
mirBase accession | MIMAT0007181 |
Sequence |
0- UCAGUAACAAAGAUUCAUCCUUGU -24
Get sequence
|
Co-mature sequence |
Oan-Mir-459_3p |
mirBase accession | MIMAT0007182 |
Sequence |
38- AGGGAGGGUCUUUGUCACUGAGU -61
Get sequence
|