MirGeneDB 3.0
MirGeneDB ID

Cja-Mir-459

Family name MIR-459 (all species)
Seed CAGUAAC
Species White-tufted-ear marmoset (Callithrix jacchus)
MiRBase ID
Paralogues
Orthologues Ami-Mir-459  Bta-Mir-459  Cfa-Mir-459  Cli-Mir-459  Cpi-Mir-459  Cpo-Mir-459  Dno-Mir-459  Dre-Mir-459  Ebu-Mir-459  Eca-Mir-459  Ete-Mir-459  Gmo-Mir-459  Hsa-Mir-459  Laf-Mir-459  Loc-Mir-459  Mal-Mir-459  Mml-Mir-459  Mmr-Mir-459  Mmu-Mir-459  Mun-Mir-459  Oan-Mir-459  Ocu-Mir-459  Pab-Mir-459  Pma-Mir-459  Rno-Mir-459  Spt-Mir-459  Sto-Mir-459  Tni-Mir-459  Xla-Mir-459-P1  Xla-Mir-459-P2  Xtr-Mir-459 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCA_011100555.2_mCalJa1.2.pat.X_genomic)		 CM021935.1: 40019583-40019643 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUUGGUCACCACUCGUUCUGUUAUUUGCAGUCAGUAACAAAGAUUCAUCCUUGUGUCCAUCAUGCAGCAAGGAGAAUCUUUGUCACUUAGUGUAAUUAAUAGCUGGACCUCGCAAGGCACG
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Structure
        10          20        30        40        50        60
CUUGGUCACCACUCGUU--|     U     GUC   A          A       GUCCA 
                   CUGUUA UUGCA   AGU ACAAAGAUUC UCCUUGU     U
                   GAUAAU AAUGU   UCA UGUUUCUAAG AGGAACG     C
GCACGGAACGCUCCAGGUC^     U     GAU   C          -       ACGUA 
 .       110       100        90        80         70
Deep sequencing
3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
To
Mature sequence

Cja-Mir-459_5p (predicted)
mirBase accessionNone
Sequence 
0- UCAGUAACAAAGAUUCAUCCUUGU -24
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Star sequence

Cja-Mir-459_3p* (predicted)
mirBase accessionNone
Sequence 
38- AAGGAGAAUCUUUGUCACUUAGU -61
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