MirGeneDB 3.0
MirGeneDB ID

Pma-Mir-459

Family name MIR-459 (all species)
Seed CAGUAAC
Species Sea Lamprey (Petromyzon marinus)
MiRBase ID pma-mir-459
Paralogues
Orthologues Ami-Mir-459  Bta-Mir-459  Cfa-Mir-459  Cja-Mir-459  Cli-Mir-459  Cpi-Mir-459  Cpo-Mir-459  Dno-Mir-459  Dre-Mir-459  Ebu-Mir-459  Eca-Mir-459  Ete-Mir-459  Gmo-Mir-459  Hsa-Mir-459  Laf-Mir-459  Loc-Mir-459  Mal-Mir-459  Mml-Mir-459  Mmr-Mir-459  Mmu-Mir-459  Mun-Mir-459  Oan-Mir-459  Ocu-Mir-459  Pab-Mir-459  Rno-Mir-459  Spt-Mir-459  Sto-Mir-459  Tni-Mir-459  Xla-Mir-459-P1  Xla-Mir-459-P2  Xtr-Mir-459 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(GCF_010993605.1_kPetMar1.pri_genomic)		 NW_022639232.1: 6921-6983 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CGUGGCUCCACGUGGCACGGCGUGGUGUGCUCAGUAACAUGGGUUCGAACCUCGCGUUGGUUCUCCGCCGAGGUUGGCCCUGCGUUGCUGUGCACAAAACGUCGACUCGAGCCCUCAGCCCUG
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Structure
        10          20        30        40        50        60 
CGUGGCUCCACGUGGCA--|     GG     U       AU   UU G       CGUUGG 
                   CGGCGU  UGUGC CAGUAAC  GGG  C AACCUCG      U
                   GCUGCA  ACACG GUCGUUG  UCC  G UUGGAGC      U
GUCCCGACUCCCGAGCUCA^     AA     U       CG   CG -       CGCCUC 
 120       110       100        90        80         70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
Br Gi Gu He Ki La Li Mo Mu Sk
Mature sequence

Pma-Mir-459_5p
mirBase accessionMIMAT0019555
Sequence 
0- UCAGUAACAUGGGUUCGAACCUCG -24
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Star sequence

Pma-Mir-459_3p* (predicted)
mirBase accessionNone
Sequence 
40- AGGUUGGCCCUGCGUUGCUGUGC -63
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