MirGeneDB 3.0
MirGeneDB ID

Tni-Mir-459

Family name MIR-459 (all species)
Seed CAGUAAC
Species Pufferfish (Tetraodon nigroviridis)
MiRBase ID
Paralogues
Orthologues Ami-Mir-459  Bta-Mir-459  Cfa-Mir-459  Cja-Mir-459  Cli-Mir-459  Cpi-Mir-459  Cpo-Mir-459  Dno-Mir-459  Dre-Mir-459  Ebu-Mir-459  Eca-Mir-459  Ete-Mir-459  Gmo-Mir-459  Hsa-Mir-459  Laf-Mir-459  Loc-Mir-459  Mal-Mir-459  Mml-Mir-459  Mmr-Mir-459  Mmu-Mir-459  Mun-Mir-459  Oan-Mir-459  Ocu-Mir-459  Pab-Mir-459  Pma-Mir-459  Rno-Mir-459  Spt-Mir-459  Sto-Mir-459  Xla-Mir-459-P1  Xla-Mir-459-P2  Xtr-Mir-459 
Node of Origin (locus) Vertebrata
Node of Origin (family) Vertebrata
Genome context
(Tetraodon_nigroviridis.TETRAODON8.dna.toplevel)		 3: 2976224-2976286 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GUUAUCGUAAACGAUUGUGAUGCGUCGCUGUCAGUAACAAGGAUUCAUCCUGUUGUAAUGCUGCAGGCUGACAGGAAAUCACUGUUACUGUGGGCGAGUGUCUCCCAAACACACACCCACACA
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Structure
        10           20        30        40        50        60  
GUUAUCGUAAACGAUUGU---|    G     GU        AG    CA       GUAAUGC 
                     GAUGC UCGCU  CAGUAACA  GAUU  UCCUGUU       \
                     CUGUG AGCGG  GUCAUUGU  CUAA  AGGACAG       U
ACACACCCACACACAAACCCU^    -     GU        CA    --       UCGGACG 
 120       110       100         90        80          70
Deep sequencing
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3' NTU Unknown
MotifsNo
Tissue expression
-   +
Sp Sp Sp To
Mature sequence

Tni-Mir-459_5p (predicted)
mirBase accessionNone
Sequence 
0- UCAGUAACAAGGAUUCAUCCUGUU -24
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Star sequence

Tni-Mir-459_3p*
mirBase accessionNone
Sequence 
41- CAGGAAAUCACUGUUACUGUGG -63
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