MirGeneDB 3.0

29 microRNA genes with seed AGAGAGC
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Tur-Mir-281 tur-mir-281 MIR-281 AGAGAGC MIMAT0023046 MIMAT0023047 HE587305.1 3874609 3874669 + Nephrozoa Nephrozoa No 1 1
Tca-Mir-281 tca-mir-281 MIR-281 AGAGAGC MIMAT0008384 MIMAT0008385 LG7 203928 203983 + Nephrozoa Nephrozoa No 1
Isc-Mir-281 None MIR-281 AGAGAGC None None NW_024609835.1 168853379 168853442 + Nephrozoa Nephrozoa No 1
Hme-Mir-281 hme-mir-281 MIR-281 AGAGAGC None MIMAT0024967 HE671164 1105686 1105744 + Nephrozoa Nephrozoa No 1
Dpu-Mir-281 dpu-mir-281 MIR-281 AGAGAGC None MIMAT0012655 DAPPUscaffold_11 1065350 1065416 - Nephrozoa Nephrozoa No 1
Dma-Mir-281 None MIR-281 AGAGAGC None None NC_046174.1 7564928 7564995 + Nephrozoa Nephrozoa No 1
Dlo-Mir-281 None MIR-281 AGAGAGC None None NC_087229.1 7675012 7675071 + Nephrozoa Nephrozoa No 1
Csc-Mir-281 None MIR-281 AGAGAGC None None NW_019384687.1 194671 194729 - Nephrozoa Nephrozoa No
Bge-Mir-281 None MIR-281 AGAGAGC None None KZ615391.1 22996 23052 - Nephrozoa Nephrozoa No 1
Aga-Mir-281 aga-mir-281 MIR-281 AGAGAGC None MIMAT0001513 NC_064601.1 86247579 86247637 - Nephrozoa Nephrozoa No 1
Aae-Mir-281 aae-mir-281 MIR-281 AGAGAGC MIMAT0014231 MIMAT0014232 supercont1.957 134462 134520 + Nephrozoa Nephrozoa No 1
Gpa-Mir-281-P1-v2 None MIR-281 AGAGAGC None None Scaffold293 205476 205540 + Glossinidae + Drosophilidae Nephrozoa No 1
Dan-Mir-281-P2 dan-mir-281-2 MIR-281 AGAGAGC MIMAT0009182 MIMAT0008429 scaffold_13266 2568952 2569020 + Drosophila Nephrozoa No 1
Dya-Mir-281-P2-v1 None MIR-281 AGAGAGC None None 2R 8893568 8893634 + Drosophila Nephrozoa No 1
Dsi-Mir-281-P2-v1 None MIR-281 AGAGAGC None None 2R 8762258 8762324 - Drosophila Nephrozoa No 1
Dmo-Mir-281-P2-v1 dmo-mir-281-2 MIR-281 AGAGAGC MIMAT0009185 MIMAT0008642 scaffold_6496 6376080 6376147 - Drosophila Nephrozoa No 1
Dme-Mir-281-P2-v1 dme-mir-281-2 MIR-281 AGAGAGC MIMAT0000349 MIMAT0000345 2R 12170164 12170230 - Drosophila Nephrozoa No 1
Gpa-Mir-281-P2-v2 None MIR-281 AGAGAGC None None Scaffold293 205740 205816 + Glossinidae + Drosophilidae Nephrozoa No 1
Dya-Mir-281-P2-v2 None MIR-281 AGAGAGC None None 2R 8893568 8893634 + Drosophila Nephrozoa No 1
Dsi-Mir-281-P2-v2 None MIR-281 AGAGAGC None None 2R 8762258 8762324 - Drosophila Nephrozoa No 1
Dmo-Mir-281-P2-v2 dmo-mir-281-2 MIR-281 AGAGAGC MIMAT0009185 MIMAT0008642 scaffold_6496 6376080 6376147 - Drosophila Nephrozoa No 1
Dme-Mir-281-P2-v2 dme-mir-281-2 MIR-281 AGAGAGC MIMAT0000349 MIMAT0000345 2R 12170164 12170230 - Drosophila Nephrozoa No 1
Lan-Mir-281-P10 None MIR-281 AGAGAGC None None LFEI01000338 326773 326829 + L. anatina Nephrozoa No 1
Lan-Mir-281-P11 None MIR-281 AGAGAGC None None LFEI01000142 432861 432917 - L. anatina Nephrozoa No 1
Lpo-Mir-281-P14 None MIR-281 AGAGAGC None None NW_013665771.1 168757 168814 + L. polyphemus Nephrozoa No 1 1
Lpo-Mir-281-P15 None MIR-281 AGAGAGC None None NW_013667680.1 140646 140703 - L. polyphemus Nephrozoa No 1 1
Lpo-Mir-281-P16 None MIR-281 AGAGAGC None None NW_013674012.1 29066 29122 + L. polyphemus Nephrozoa Unknown 1
Lpo-Mir-281-P17 None MIR-281 AGAGAGC None None NW_013675008.1 6583 6640 + L. polyphemus Nephrozoa No 1 1
Lpo-Mir-281-P18 None MIR-281 AGAGAGC None None NW_013666563.1 344177 344234 + L. polyphemus Nephrozoa No 1 1

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all