MirGeneDB 3.0

12 microRNA genes with seed CAACAAA
Sort by genome coordinates Motifs
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Rno-Mir-338-P2-as rno-mir-3065 MIR-338 CAACAAA MIMAT0017839 MIMAT0017840 chr10 109195254 109195316 + Amniota Vertebrata No 1
Pab-Mir-338-P2-as None MIR-338 CAACAAA None None CM054698.2 96593343 96593405 + Amniota Vertebrata Unknown 1
Mmu-Mir-338-P2-as mmu-mir-3065 MIR-338 CAACAAA MIMAT0014836 MIMAT0014837 chr11 120014780 120014841 + Amniota Vertebrata Yes
Mml-Mir-338-P2-as None MIR-338 CAACAAA None None CM014351.1 77460701 77460763 + Amniota Vertebrata Yes 1
Hsa-Mir-338-P2-as hsa-mir-3065 MIR-338 CAACAAA MIMAT0015066 MIMAT0015378 chr17 81125886 81125948 + Amniota Vertebrata Yes 1
Ete-Mir-338-P2-as None MIR-338 CAACAAA None None manual_Ete-Mir-338-P1 31 91 - Amniota Vertebrata Yes 1
Eca-Mir-338-P2-as None MIR-338 CAACAAA None None CM009158.1 1969257 1969319 - Amniota Vertebrata No 1
Cfa-Mir-338-P2-as None MIR-338 CAACAAA None None chr9 918648 918710 - Amniota Vertebrata Yes 1
Bta-Mir-338-P2-as None MIR-338 CAACAAA None None NC_037346.1 51569630 51569693 - Amniota Vertebrata No
Eca-Mir-421-P1-v1 eca-mir-545 MIR-421 CAACAAA None MIMAT0013239 CM009179.1 58620605 58620667 - Eutheria Eutheria No
Cfa-Mir-421-P1-v1 cfa-mir-545 MIR-421 CAACAAA MIMAT0009911 None chrX 57590222 57590284 - Eutheria Eutheria No
Bta-Mir-421-P1-v1 bta-mir-545 MIR-421 CAACAAA MIMAT0003806 MIMAT0003807 NC_037357.1 76853220 76853282 + Eutheria Eutheria No

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all