MirGeneDB 3.0

5 Xenopus tropicalis microRNA genes with seed AAAGUGC (all species)
Sort by genome coordinates Motifs Tissue expression
 +
MirGeneDB ID MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC An Br Em Em He Ve
Xtr-Mir-17-P1a xtr-mir-17 MIR-17 AAAGUGC MIMAT0003564 MIMAT0003565 chr2 120020393 120020454 - Gnathostomata Vertebrata No
Xtr-Mir-17-P1c xtr-mir-106 MIR-17 AAAGUGC MIMAT0003583 None chr8 47198222 47198278 - Gnathostomata Vertebrata Unknown 1
Xtr-Mir-17-P4a xtr-mir-20a MIR-17 AAAGUGC MIMAT0003669 MIMAT0003670 chr2 120019995 120020054 - Gnathostomata Vertebrata No 1
Xtr-Mir-17-P4c xtr-mir-20b MIR-17 AAAGUGC MIMAT0003707 None chr8 47197940 47198000 - Gnathostomata Vertebrata Unknown 1 1
Xtr-Mir-17-P4d xtr-mir-93a MIR-17 AAAGUGC MIMAT0003659 None chrUn_NW_016683390v1 107136 107196 - Gnathostomata Vertebrata No 1

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all

Download genome coordinates (GFF format)

Download count matrix