| MirGeneDB ID | Aga-Mir-971 |
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| Family name |
MIR-971 (all species) |
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| Seed |
UGGUGUU |
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| Species |
African malaria mosquito (Anopheles gambiae) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Aae-Mir-971
Bge-Mir-971-v1
Bge-Mir-971-v2
Dan-Mir-971
Dlo-Mir-971
Dme-Mir-971
Dmo-Mir-971
Dsi-Mir-971
Dya-Mir-971
Gpa-Mir-971
Hme-Mir-971
Tca-Mir-971
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| Node of Origin (locus) |
Neoptera
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| Node of Origin (family) |
Neoptera
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Genome context
(GCF_943734735.2_idAnoGambNW_F1_1_genomic) |
NC_064601.1: 15491642-15491717 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
ACGCAAGCUGCACAAACCUCGCUCUCGGCUGGCUGUAAGUAGAACAGCAAGCUCGUACUGUUUCGCCACGGACGACAAUUUGCUUGGUGUUAUAUCUUACAGUGAGCCGGGUCGGGAAAAUUCAACGAAAAUCGAG
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
ACGCAAGCUGCACAAAC---| CU G UAG- G UCGUACUGUUUCGC
CUCG CUCGGCU GCUGUAAG AACA CAAGC \
GGGC GGGCCGA UGACAUUC UUGU GUUCG C
GAGCUAAAAGCAACUUAAAA^ U- G UAUA G UUUAACAGCAGGCA
130 120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
| Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
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| Star sequence |
Aga-Mir-971_5p* (predicted) |
| mirBase accession | None |
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| Sequence |
0- GGCUGUAAGUAGAACAGCAAGC -22
Get sequence
|
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| Mature sequence |
Aga-Mir-971_3p |
| mirBase accession | None |
|---|
| Sequence |
53- UUGGUGUUAUAUCUUACAGUGAG -76
Get sequence
|
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