MirGeneDB 3.0
MirGeneDB ID

Tca-Mir-971

Family name MIR-971 (all species)
Seed CACUCUA
Species Red flour beetle (Tribolium castaneum)
MiRBase ID tca-mir-971b
Paralogues
Orthologues Aae-Mir-971  Aga-Mir-971  Bge-Mir-971-v1  Bge-Mir-971-v2  Dan-Mir-971  Dlo-Mir-971  Dme-Mir-971  Dmo-Mir-971  Dsi-Mir-971  Dya-Mir-971  Gpa-Mir-971  Hme-Mir-971 
Node of Origin (locus) Neoptera
Node of Origin (family) Neoptera
Genome context
(Tcas5.2)		 LG4: 238976-239037 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
ACCACCGAGCUUUGAGUGUGUAUAGUCGGGUCACUCUAAGUUUGAACACCAAGCUACAUUUAGCUCGUUUGGUGUUCUACCUUACAGUGAGCGGACUGUACACCAAAUCAUCACUUCGCAAG
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Structure
        10          20        30        40        50        60
ACCACCGAGCUUUGAGU--|         GGG     C    UUU           UACAU 
                   GUGUAUAGUC   UCACU UAAG   GAACACCAAGC     U
                   CACAUGUCAG   AGUGA AUUC   CUUGUGGUUUG     U
GAACGCUUCACUACUAAAC^         GCG     C    CAU           CUCGA 
120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Ad Ea Em Em Em Em Em Fe Fe Fe Fe Oo
Mature sequence

Tca-Mir-971_5p
mirBase accessionMIMAT0045561
Sequence 
0- UCACUCUAAGUUUGAACACCAAGC -24
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Co-mature sequence

Tca-Mir-971_3p
mirBase accessionMIMAT0045562
Sequence 
38- UUGGUGUUCUACCUUACAGUGAGC -62
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