| MirGeneDB ID | Bge-Mir-971-v1 |
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| Family name |
MIR-971 (all species) |
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| Seed |
ACUCUAA |
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| Species |
Cockroach (Blattella germanica) |
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| MiRBase ID |
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| Paralogues |
Bge-Mir-971-v2
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| Orthologues |
Aae-Mir-971
Aga-Mir-971
Dan-Mir-971
Dlo-Mir-971
Dme-Mir-971
Dmo-Mir-971
Dsi-Mir-971
Dya-Mir-971
Gpa-Mir-971
Hme-Mir-971
Tca-Mir-971
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| Node of Origin (locus) |
Neoptera
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| Node of Origin (family) |
Neoptera
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Genome context
(Bger_2.0) |
KZ615707.1: 119208-119269 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
AGACUGCUGUGGAUAUCUCUGAGGUCCGUCCACUCUAAGCUCGAACACCAAGCCUGGAACCUGUACCGUUUGGUGUUCUACCUUACAGUGAGCGGACUUCAGUAGCAAGCAUCACGAUCAAG
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
AGACUGCUGUGGAUAUCU--| UC C CUC CUGGAA
CUGAGGUCCG CACU UAAG GAACACCAAGC C
GACUUCAGGC GUGA AUUC CUUGUGGUUUG C
GAACUAGCACUACGAACGAU^ GA C CAU CCAUGU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Ad |
Ad |
Co |
Co |
Di |
Di |
Eg |
Eg |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
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| Mature sequence |
Bge-Mir-971-v1_5p |
| mirBase accession | None |
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| Sequence |
0- CACUCUAAGCUCGAACACCAAGC -23
Get sequence
|
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| Star sequence |
Bge-Mir-971-v1_3p* |
| mirBase accession | None |
|---|
| Sequence |
39- UUGGUGUUCUACCUUACAGUGAG -62
Get sequence
|
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