MirGeneDB 3.0

MirGeneDB ID

Dlo-Mir-971

Family name MIR-971 (all species)
Seed UGGUGUU
Species Braconid wasp (Diachasmimorpha longicaudata)
MiRBase ID
Paralogues
Orthologues Aae-Mir-971  Aga-Mir-971  Bge-Mir-971-v1  Bge-Mir-971-v2  Dan-Mir-971  Dme-Mir-971  Dmo-Mir-971  Dsi-Mir-971  Dya-Mir-971  Gpa-Mir-971  Hme-Mir-971  Tca-Mir-971 
Node of Origin (locus) Neoptera
Node of Origin (family) Neoptera
Genome context
(GCF_034640455.1_iyDiaLong2_genomic)
NC_087242.1: 4800406-4800467 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GUGAAGGGAAUUAACGAGUCCCCAUCGGUUCACUCUAAGUUCGAAUGCCGAGCCCUGUAUAAAAGCAGCUUGGUGUUCUACCUUACAGUGACUCGCUGGUGGUCACAAUCCAGCGAAGCCGU
Get precursor sequence
Structure
        10        20           30        40        50        60
GUGAAGGGAAUUAACGAGUCC        ---|    C    UUC           CCUGUA 
                     CCAUCGGU   UCACU UAAG   GAAUGCCGAGC      U
                     GGUGGUCG   AGUGA AUUC   CUUGUGGUUCG      A
UGCCGAAGCGACCUAACACU-        CUC^    C    CAU           ACGAAA 
120       110        100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
 +
Sr Sr
Star sequence

Dlo-Mir-971_5p*

mirBase accessionNone
Sequence
0- CACUCUAAGUUCGAAUGCCGAGC -23
Get sequence
Mature sequence

Dlo-Mir-971_3p

mirBase accessionNone
Sequence
39- UUGGUGUUCUACCUUACAGUGAC -62
Get sequence