| MirGeneDB ID | Aga-Mir-999 |
|---|
| Family name |
MIR-999 (all species) |
|---|
| Seed |
GUUAACU |
|---|
| Species |
African malaria mosquito (Anopheles gambiae) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Aae-Mir-999
Dan-Mir-999
Dme-Mir-999
Dmo-Mir-999
Dsi-Mir-999
Dya-Mir-999
Gpa-Mir-999
|
|---|
| Node of Origin (locus) |
Diptera
|
|---|
| Node of Origin (family) |
Diptera
|
|---|
Genome context
(GCF_943734735.2_idAnoGambNW_F1_1_genomic) |
NC_064601.1: 8164995-8165055 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UCAUUUCAAAUUCGAAUCGCAUUGGCAAGGACGCGGUCAUGCAGUCUAAUAUUUGGCAUUCGAUUCAAAUGUUAACUGUAAGACUGUGUCUUUGACACUGUUUCUAGCAUCGUGGAAAUGA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UCAUUUCAAAUUCGAAUC--| U G A C UGGCAU
GCA UG CAAGGACGCGGUC UGCAGU UAAUAUU U
UGU AC GUUUCUGUGUCAG AUGUCA AUUGUAA C
AGUAAAGGUGCUACGAUCUU^ C A A - ACUUAG
. 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
| Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
Sr |
| |
|
|
|
|
|
|
|
|
|
|---|
| Star sequence |
Aga-Mir-999_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- ACGCGGUCAUGCAGUCUAAUAUU -23
Get sequence
|
|---|
| Mature sequence |
Aga-Mir-999_3p |
| mirBase accession | None |
|---|
| Sequence |
39- UGUUAACUGUAAGACUGUGUCU -61
Get sequence
|
|---|
