MirGeneDB 3.0

MirGeneDB ID

Aga-Mir-999

Family name MIR-999 (all species)
Seed GUUAACU
Species African malaria mosquito (Anopheles gambiae)
MiRBase ID
Paralogues
Orthologues Aae-Mir-999  Dan-Mir-999  Dme-Mir-999  Dmo-Mir-999  Dsi-Mir-999  Dya-Mir-999  Gpa-Mir-999 
Node of Origin (locus) Diptera
Node of Origin (family) Diptera
Genome context
(GCF_943734735.2_idAnoGambNW_F1_1_genomic)
NC_064601.1: 8164995-8165055 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UCAUUUCAAAUUCGAAUCGCAUUGGCAAGGACGCGGUCAUGCAGUCUAAUAUUUGGCAUUCGAUUCAAAUGUUAACUGUAAGACUGUGUCUUUGACACUGUUUCUAGCAUCGUGGAAAUGA
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Structure
        10          20        30        40        50        60
UCAUUUCAAAUUCGAAUC--|  U  G             A      C       UGGCAU 
                    GCA UG CAAGGACGCGGUC UGCAGU UAAUAUU      U
                    UGU AC GUUUCUGUGUCAG AUGUCA AUUGUAA      C
AGUAAAGGUGCUACGAUCUU^  C  A             A      -       ACUUAG 
 .       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ab Ab He He Mi Mi Ov Ov Ov
Star sequence

Aga-Mir-999_5p* (predicted)

mirBase accessionNone
Sequence
0- ACGCGGUCAUGCAGUCUAAUAUU -23
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Mature sequence

Aga-Mir-999_3p

mirBase accessionNone
Sequence
39- UGUUAACUGUAAGACUGUGUCU -61
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