| MirGeneDB ID | Dya-Mir-999 |
|---|
| Family name |
MIR-999 (all species) |
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| Seed |
GUUAACU |
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| Species |
Fruit fly (Drosophila yakuba) |
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| MiRBase ID |
|
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| Paralogues |
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| Orthologues |
Aae-Mir-999
Dan-Mir-999
Dme-Mir-999
Dmo-Mir-999
Dsi-Mir-999
|
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| Node of Origin (locus) |
Diptera
|
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| Node of Origin (family) |
Diptera
|
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Genome context
(Drosophila_yakuba.dyak_caf1.dna.toplevel) |
3R: 18443963-18444022 [-]
UCSC
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
GAGAAGAAAGGAUGCCGCUCAAUUACCCCGACAUAGUCAUACGGUGAAUGUUGUGUAUUGGAGACCAAUGUUAACUGUAAGACUGUGUCUCGGUGGUUGCCAGCCACACCAGCCACAUCA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
GAGAAGAAAGGAUGCCGCU--| CC A G GUGUAU
CAAUUACC GACAUAGUC UACGGU AAUGUU U
GUUGGUGG CUGUGUCAG AUGUCA UUGUAA G
ACUACACCGACCACACCGACC^ CU A A CCAGAG
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17), UGUG in loop |
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Tissue expression
|
|
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| Star sequence |
Dya-Mir-999_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- ACAUAGUCAUACGGUGAAUGUU -22
Get sequence
|
|---|
| Mature sequence |
Dya-Mir-999_3p |
| mirBase accession | None |
|---|
| Sequence |
38- UGUUAACUGUAAGACUGUGUCU -60
Get sequence
|
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