| MirGeneDB ID | Dmo-Mir-999 |
|---|
| Family name |
MIR-999 (all species) |
|---|
| Seed |
GUUAACU |
|---|
| Species |
Fruit fly (Drosophila mojavensis) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
|
|---|
| Orthologues |
Aae-Mir-999
Aga-Mir-999
Dan-Mir-999
Dme-Mir-999
Dsi-Mir-999
Dya-Mir-999
Gpa-Mir-999
|
|---|
| Node of Origin (locus) |
Diptera
|
|---|
| Node of Origin (family) |
Diptera
|
|---|
Genome context
(Dmoj_caf1) |
scaffold_6540: 17209669-17209727 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
AGGGCAGUGAGUCGCCGCUCAAUUACCGUGACAUAGUCGUACGGUGAAUGUUGUUUAUGGAGUCCAAUGUUAACUGUAAGACUGUGUCUCGGUGGUUGCAGCCAAACAACAGCGACCCC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
AGGGCAGUGAGUCGCCG- -| U G G GUUUAU
CU CAAUUACCG GACAUAGUC UACGGU AAUGUU \
GA GUUGGUGGC CUGUGUCAG AUGUCA UUGUAA G
CCCCAGCGACAACAAACC C^ U A A CCUGAG
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Dmo-Mir-999_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- ACAUAGUCGUACGGUGAAUGUU -22
Get sequence
|
|---|
| Mature sequence |
Dmo-Mir-999_3p |
| mirBase accession | None |
|---|
| Sequence |
37- UGUUAACUGUAAGACUGUGUCU -59
Get sequence
|
|---|
