| MirGeneDB ID | Gpa-Mir-999 |
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| Family name |
MIR-999 (all species) |
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| Seed |
GUUAACU |
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| Species |
Tsetse fly (Glossina pallidipes) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Aae-Mir-999
Aga-Mir-999
Dan-Mir-999
Dme-Mir-999
Dmo-Mir-999
Dsi-Mir-999
Dya-Mir-999
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| Node of Origin (locus) |
Diptera
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| Node of Origin (family) |
Diptera
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Genome context
(GpalI1) |
Scaffold168: 823176-823236 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GGAAAUGACAUUAUAAGCUCAUCUACUGUGACAUAGUCGUACAGAAAAUAUUGUGUUAUACGAGUCCAAUGUUAACUGUAAGACUGUGUCUUGGUGGCUUGAAAUAAACUUCGACACAAUG
Get precursor sequence
|
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| Structure | 10 20 30 40 50
GGAAAUGACAUUAUAAGC- U-| U G AA GUGUUAU
UCA CUACUG GACAUAGUC UACAG AAUAUU \
AGU GGUGGU CUGUGUCAG AUGUC UUGUAA A
GUAACACAGCUUCAAAUAA UC^ U A AA CCUGAGC
. 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17), UGUG in loop |
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Tissue expression
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| Star sequence |
Gpa-Mir-999_5p* |
| mirBase accession | None |
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| Sequence |
0- ACAUAGUCGUACAGAAAAUAUU -22
Get sequence
|
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| Mature sequence |
Gpa-Mir-999_3p |
| mirBase accession | None |
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| Sequence |
39- UGUUAACUGUAAGACUGUGUCU -61
Get sequence
|
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