MirGeneDB 3.0
MirGeneDB ID

Dsi-Mir-999

Family name MIR-999 (all species)
Seed GUUAACU
Species Fruit fly (Drosophila simulans)
MiRBase ID dsi-mir-999
Paralogues
Orthologues Aae-Mir-999  Aga-Mir-999  Dan-Mir-999  Dme-Mir-999  Dmo-Mir-999  Dya-Mir-999  Gpa-Mir-999 
Node of Origin (locus) Diptera
Node of Origin (family) Diptera
Genome context
(Drosophila_simulans.ASM75419v3.dna.toplevel)		 3R: 17135753-17135812 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GAGAAGAAAGGAUGCCGCUCAAUUACCCCGACAUAGUCGUACGGUGAAUGUUGUGUAUUGGAGACCAAUGUUAACUGUAAGACUGUGUCUCGGUGGUUGCCAGCCCAGCCACACAGCCCA
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Structure
        10          20        30        40        50         
GAGAAGAAAGGAUGCCGCU--|       CC         G      G      GUGUAU 
                     CAAUUACC  GACAUAGUC UACGGU AAUGUU      U
                     GUUGGUGG  CUGUGUCAG AUGUCA UUGUAA      G
ACCCGACACACCGACCCGACC^       CU         A      A      CCAGAG 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
He Wh
Star sequence

Dsi-Mir-999_5p*
mirBase accessionMIMAT0012455
Sequence 
0- ACAUAGUCGUACGGUGAAUGUU -22
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Mature sequence

Dsi-Mir-999_3p
mirBase accessionMIMAT0012456
Sequence 
38- UGUUAACUGUAAGACUGUGUCU -60
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