| MirGeneDB ID | Dan-Mir-999 |
|---|
| Family name |
MIR-999 (all species) |
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| Seed |
GUUAACU |
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| Species |
Fruit fly (Drosophila ananassae) |
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| MiRBase ID |
|
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| Paralogues |
|
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| Orthologues |
Aae-Mir-999
Aga-Mir-999
Dme-Mir-999
Dmo-Mir-999
Dsi-Mir-999
Dya-Mir-999
Gpa-Mir-999
|
|---|
| Node of Origin (locus) |
Diptera
|
|---|
| Node of Origin (family) |
Diptera
|
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Genome context
(Dana_caf1) |
scaffold_13340: 8622532-8622591 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
ACCAAAAAAGGAUGCCGCUCAAUUACCCCGACAUAGUCGUACGGUGAAUGUUGUGUAUUGGAAAGCAAUGUUAACUGUAAGACUGUGUCUCGGUGGUUGCCAGCUAGCCUACCAUCUCAC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
ACCAAAAAAGGAUGCCGCU--| CC G G GUGUAU
CAAUUACC GACAUAGUC UACGGU AAUGUU U
GUUGGUGG CUGUGUCAG AUGUCA UUGUAA G
CACUCUACCAUCCGAUCGACC^ CU A A CGAAAG
. 110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | UGUG in loop |
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Tissue expression
|
|
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| Star sequence |
Dan-Mir-999_5p* |
| mirBase accession | None |
|---|
| Sequence |
0- ACAUAGUCGUACGGUGAAUGUU -22
Get sequence
|
|---|
| Mature sequence |
Dan-Mir-999_3p |
| mirBase accession | None |
|---|
| Sequence |
38- UGUUAACUGUAAGACUGUGUCU -60
Get sequence
|
|---|
