MirGeneDB 3.0
MirGeneDB ID

Ava-Mir-2-o139b-v2

Family name MIR-2 (all species)
Seed CGCCUAC
Species Bdelloid rotifer (Adineta vaga)
MiRBase ID
Paralogues Ava-Mir-2-o139a  Ava-Mir-2-o139b-v1  Ava-Mir-2-o140a  Ava-Mir-2-o140b  Ava-Mir-2-o141a  Ava-Mir-2-o141b 
Orthologues Gsp-Mir-2  Pca-Mir-2-o139  Ple-Mir-2 
Node of Origin (locus) A. vaga
Node of Origin (family) Protostomia
Genome context
(GCA_021613535.1_ASM2161353v1_AVA)		 CP075494.1: 5318244-5318302 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AAAUGAAAUCUGUUGUGAAUUGAAACUAUUCCGCCUACUGGUUGUGAUUAUGUACAAAUGAAAUCAUAUCACAGCCAGCUUUGGUGGAAUGGAAAUCACAUGAAUCGACUACGACGAUA
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Structure
        10        20          30          40        50        
AAAUGAAAUCUGUUGUGAAU-   AA-          UA--|          U   UACAA 
                     UGA   CUAUUCCGCC    CUGGUUGUGAU AUG     A
                     ACU   GGUAAGGUGG    GACCGACACUA UAC     U
AUAGCAGCAUCAGCUAAGUAC   AAA          UUUC^          -   UAAAG 
       110       100        90        80        70         60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Sr Sr
Mature sequence

Ava-Mir-2-o139b-v2_5p
mirBase accessionNone
Sequence 
0- CCGCCUACUGGUUGUGAUUAUG -22
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Star sequence

Ava-Mir-2-o139b-v2_3p*
mirBase accessionNone
Sequence 
36- UAUCACAGCCAGCUUUGGUGGAA -59
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