MirGeneDB ID | Bge-Mir-929-v1 |
Family name |
MIR-929 (all species) |
Seed |
AAUUGAC |
Species |
Cockroach (Blattella germanica) |
MiRBase ID |
|
Paralogues |
Bge-Mir-929-v2
|
Orthologues |
Aga-Mir-929
Dan-Mir-929
Dlo-Mir-929-v1
Dme-Mir-929
Dmo-Mir-929
Dsi-Mir-929
Dya-Mir-929
Gpa-Mir-929
Hme-Mir-929
Tca-Mir-929
|
Node of Origin (locus) |
Neoptera
|
Node of Origin (family) |
Neoptera
|
Genome context (Bger_2.0) |
KZ620164.1: 1254-1316 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CGCGAUGUGAAAUUGAACUCAACCGGGGUCAAAUUGACUCUAGUAGGGAGUCCGUAUUAUAAACAUAGUGACUCCCUAACGGAGUCAGAUUGACCUCUUUGAAGUGAACACGACGUGCGAAGA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CGCGAUGUGAAAUUGAAC---| CC A AG CGUAUUAU
UCAA GGGGUCAA UUGACUCU UAGGGAGUC \
AGUU CUCCAGUU GACUGAGG AUCCCUCAG A
AGAAGCGUGCAGCACAAGUGA^ U- A CA UGAUACAA
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
Yes
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
Ad |
Ad |
Co |
Co |
Di |
Di |
Eg |
Eg |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Mature sequence |
Bge-Mir-929-v1_5p |
mirBase accession | None |
Sequence |
0- AAAUUGACUCUAGUAGGGAGUC -22
Get sequence
|
Star sequence |
Bge-Mir-929-v1_3p* |
mirBase accession | None |
Sequence |
41- CUCCCUAACGGAGUCAGAUUGA -63
Get sequence
|