MirGeneDB ID | Hme-Mir-929 |
Family name |
MIR-929 (all species) |
Seed |
AAUUGAC |
Species |
Longwing butterfly (Heliconius melpomene) |
MiRBase ID |
hme-mir-929
|
Paralogues |
|
Orthologues |
Aae-Mir-929-P1
Aae-Mir-929-P2
Aga-Mir-929
Bge-Mir-929-v1
Bge-Mir-929-v2
Dan-Mir-929
Dlo-Mir-929-v1
Dlo-Mir-929-v2
Dme-Mir-929
Dmo-Mir-929
Dsi-Mir-929
Dya-Mir-929
Gpa-Mir-929
Tca-Mir-929
|
Node of Origin (locus) |
Neoptera
|
Node of Origin (family) |
Neoptera
|
Genome context (Hmel_1) |
HE672076: 29049-29106 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AAAAGAAAAAAUGUUUAGCUCAUGGAUGUGAAAUUGACUCUAGUAGGGAGUCCGUUUCAACGCGACUCCCUAAUCGAGUCAGGUUGACUUCUUUGAGUAUAUCUCAACAUUGAUUUAA
Get precursor sequence
|
Structure | 10 20 30 40 50
AAAAGAAAAAAUGUUUA---| U U G A UAG CGUUU
GCUCA GGA GU AA UUGACUC UAGGGAGUC \
UGAGU UCU CA UU GACUGAG AUCCCUCAG C
AAUUUAGUUACAACUCUAUA^ U U G G CUA CGCAA
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Hme-Mir-929_5p |
mirBase accession | MIMAT0024992 |
Sequence |
0- AAAUUGACUCUAGUAGGGAGUC -22
Get sequence
|
Star sequence |
Hme-Mir-929_3p* |
mirBase accession | None |
Sequence |
35- CUCCCUAAUCGAGUCAGGUUGAC -58
Get sequence
|