MirGeneDB 3.0

MirGeneDB ID

Dme-Mir-929

Family name MIR-929 (all species)
Seed AAUUGAC
Species Fruit fly (Drosophila melanogaster)
MiRBase ID dme-mir-929
Paralogues
Orthologues Aae-Mir-929-P1  Aae-Mir-929-P2  Aga-Mir-929  Bge-Mir-929-v1  Bge-Mir-929-v2  Dan-Mir-929  Dlo-Mir-929-v1  Dlo-Mir-929-v2  Dmo-Mir-929  Dsi-Mir-929  Dya-Mir-929  Gpa-Mir-929  Hme-Mir-929  Tca-Mir-929 
Node of Origin (locus) Neoptera
Node of Origin (family) Neoptera
Genome context
(Drosophila_melanogaster_BDGP6)
3R: 4295385-4295441 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GACAUGGCGGAACCAGUCCUGGUGGAGCUCAAAUUGACUCUAGUAGGGAGUCCUUUAAUGAGCGACUCCCUAACGGAGUCAGAUUGAGCUGCAAAGGAGCGACACAACAGAGGAGCA
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Structure
        10           20        30        40        50        
GACAUGGCGGAACCAGU---|  GG  G       A        AG         CUUUA 
                    CCU  UG AGCUCAA UUGACUCU  UAGGGAGUC     \
                    GGA  AC UCGAGUU GACUGAGG  AUCCCUCAG     A
ACGAGGAGACAACACAGCGA^  A-  G       A        CA         CGAGU 
     110       100         90        80        70        60
Deep sequencing
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CommentThere is a second Dicer cut -1 on both arms. This might be a result of a second Drosha cut shifted again -1. In which case the 3p arm is the mature form of this minor set of reads.
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Bo He He La Ov Sa Wh
Mature sequence

Dme-Mir-929_5p

mirBase accessionMIMAT0020892
Sequence
0- AAAUUGACUCUAGUAGGGAGUC -22
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Star sequence

Dme-Mir-929_3p*

mirBase accessionMIMAT0005511
Sequence
35- CUCCCUAACGGAGUCAGAUUGA -57
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Proposed targets microrna.org: MIMAT0005511
TargetScanFly: dme-miR-929