MirGeneDB ID | Dsi-Mir-929 |
Family name |
MIR-929 (all species) |
Seed |
AAUUGAC |
Species |
Fruit fly (Drosophila simulans) |
MiRBase ID |
dsi-mir-929
|
Paralogues |
|
Orthologues |
Aae-Mir-929-P1
Aae-Mir-929-P2
Aga-Mir-929
Bge-Mir-929-v1
Bge-Mir-929-v2
Dan-Mir-929
Dlo-Mir-929-v1
Dlo-Mir-929-v2
Dme-Mir-929
Dmo-Mir-929
Dya-Mir-929
Gpa-Mir-929
Hme-Mir-929
Tca-Mir-929
|
Node of Origin (locus) |
Neoptera
|
Node of Origin (family) |
Neoptera
|
Genome context (Drosophila_simulans.ASM75419v3.dna.toplevel) |
3R: 105504-105560 [+]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GGCAUGGCGCAACCAGUCCUGGUGAAGCUCAAAUUGACUCUAGUAGGGAGUCCUUUAAUGAGCGACUCCCUAACGGAGUCAGAUUGAGCUACAAAGGAGCGAGACAACAGAGGAGCA
Get precursor sequence
|
Structure | 10 20 30 40 50
GGCAUGGCGCAACCAGU---| GG A A AG CUUUA
CCU UG AGCUCAA UUGACUCU UAGGGAGUC \
GGA AC UCGAGUU GACUGAGG AUCCCUCAG A
ACGAGGAGACAACAGAGCGA^ A- A A CA CGAGU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Dsi-Mir-929_5p |
mirBase accession | MIMAT0012459 |
Sequence |
0- AAAUUGACUCUAGUAGGGAGUC -22
Get sequence
|
Star sequence |
Dsi-Mir-929_3p* |
mirBase accession | MIMAT0012460 |
Sequence |
35- CUCCCUAACGGAGUCAGAUUGA -57
Get sequence
|