MirGeneDB 3.0

MirGeneDB ID

Gpa-Mir-929

Family name MIR-929 (all species)
Seed AAUUGAC
Species Tsetse fly (Glossina pallidipes)
MiRBase ID
Paralogues
Orthologues Aae-Mir-929-P1  Aae-Mir-929-P2  Aga-Mir-929  Bge-Mir-929-v1  Bge-Mir-929-v2  Dan-Mir-929  Dlo-Mir-929-v1  Dlo-Mir-929-v2  Dme-Mir-929  Dmo-Mir-929  Dsi-Mir-929  Dya-Mir-929  Hme-Mir-929  Tca-Mir-929 
Node of Origin (locus) Neoptera
Node of Origin (family) Neoptera
Genome context
(GpalI1)
Scaffold28: 1414131-1414190 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GAUUAUGGCUUCAGAAUUCAGUUGCAGUUCAAAUUGACUCUAGUAGGGAGUCCUUUUUAACUGAGCGACUCCCUAACGGAGUCAGAUUGAAUUACUUGCUGAGCUUAACAACGAUAUCAU
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Structure
        10         20         30        40        50         
GAUUAUGGCUUCAGAAU-     UGC-|      A        AG         CUUUUU 
                  UCAGU    AGUUCAA UUGACUCU  UAGGGAGUC      A
                  AGUCG    UUAAGUU GACUGAGG  AUCCCUCAG      A
UACUAUAGCAACAAUUCG     UUCA^      A        CA         CGAGUC 
.       110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl
Mature sequence

Gpa-Mir-929_5p

mirBase accessionNone
Sequence
0- AAAUUGACUCUAGUAGGGAGUC -22
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Co-mature sequence

Gpa-Mir-929_3p

mirBase accessionNone
Sequence
38- CUCCCUAACGGAGUCAGAUUGA -60
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