MirGeneDB 3.0

MirGeneDB ID

Tca-Mir-929

Family name MIR-929 (all species)
Seed AUUGACU
Species Red flour beetle (Tribolium castaneum)
MiRBase ID tca-mir-929
Paralogues
Orthologues Aae-Mir-929-P1  Aae-Mir-929-P2  Aga-Mir-929  Bge-Mir-929-v1  Bge-Mir-929-v2  Dan-Mir-929  Dlo-Mir-929-v1  Dlo-Mir-929-v2  Dme-Mir-929  Dmo-Mir-929  Dsi-Mir-929  Dya-Mir-929  Gpa-Mir-929  Hme-Mir-929 
Node of Origin (locus) Neoptera
Node of Origin (family) Neoptera
Genome context
(Tcas5.2)
LG9: 8050350-8050407 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UUAAGAAGACGGCCAUCUUAAUCGGGGUCAAAUUGACUCUAGUAGGGAGUCCGUUACUUUAUAGCGACUCCCUAACGGAGUCAGGUUGACUCCCUUUGAGGGAAAUCUACACCUGGAG
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Structure
        10          20        30        40        50        
UUAAGAAGACGGCCAUC--|   UC        A        AG         CGUUAC 
                   UUAA  GGGGUCAA UUGACUCU  UAGGGAGUC      U
                   AGUU  CCUCAGUU GACUGAGG  AUCCCUCAG      U
GAGGUCCACAUCUAAAGGG^   UC        G        CA         CGAUAU 
      110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
 +
Ad Ea Em Em Em Em Em Fe Fe Fe Fe Oo
Mature sequence

Tca-Mir-929_5p

mirBase accessionMIMAT0008395
Sequence
0- AAUUGACUCUAGUAGGGAGUC -21
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Star sequence

Tca-Mir-929_3p*

mirBase accessionMIMAT0019133
Sequence
37- CUCCCUAACGGAGUCAGGUUG -58
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