MirGeneDB ID | Tca-Mir-929 |
Family name |
MIR-929 (all species) |
Seed |
AUUGACU |
Species |
Red flour beetle (Tribolium castaneum) |
MiRBase ID |
tca-mir-929
|
Paralogues |
|
Orthologues |
Aae-Mir-929-P1
Aae-Mir-929-P2
Aga-Mir-929
Bge-Mir-929-v1
Bge-Mir-929-v2
Dan-Mir-929
Dlo-Mir-929-v1
Dlo-Mir-929-v2
Dme-Mir-929
Dmo-Mir-929
Dsi-Mir-929
Dya-Mir-929
Gpa-Mir-929
Hme-Mir-929
|
Node of Origin (locus) |
Neoptera
|
Node of Origin (family) |
Neoptera
|
Genome context (Tcas5.2) |
LG9: 8050350-8050407 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UUAAGAAGACGGCCAUCUUAAUCGGGGUCAAAUUGACUCUAGUAGGGAGUCCGUUACUUUAUAGCGACUCCCUAACGGAGUCAGGUUGACUCCCUUUGAGGGAAAUCUACACCUGGAG
Get precursor sequence
|
Structure | 10 20 30 40 50
UUAAGAAGACGGCCAUC--| UC A AG CGUUAC
UUAA GGGGUCAA UUGACUCU UAGGGAGUC U
AGUU CCUCAGUU GACUGAGG AUCCCUCAG U
GAGGUCCACAUCUAAAGGG^ UC G CA CGAUAU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
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Ad |
Ea |
Em |
Em |
Em |
Em |
Em |
Fe |
Fe |
Fe |
Fe |
Oo |
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Mature sequence |
Tca-Mir-929_5p |
mirBase accession | MIMAT0008395 |
Sequence |
0- AAUUGACUCUAGUAGGGAGUC -21
Get sequence
|
Star sequence |
Tca-Mir-929_3p* |
mirBase accession | MIMAT0019133 |
Sequence |
37- CUCCCUAACGGAGUCAGGUUG -58
Get sequence
|