MirGeneDB 3.0

MirGeneDB ID

Bta-Mir-2285-P10

Family name MIR-2285 (all species)
Seed AAACCUG
Species Cow (Bos taurus)
MiRBase ID
Paralogues Bta-Mir-2285-P1  Bta-Mir-2285-P2  Bta-Mir-2285-P3  Bta-Mir-2285-P4  Bta-Mir-2285-P5  Bta-Mir-2285-P6  Bta-Mir-2285-P7  Bta-Mir-2285-P8  Bta-Mir-2285-P9  Bta-Mir-2285-P11 
Orthologues
Node of Origin (locus) B. taurus
Node of Origin (family) B. taurus
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037333.1: 46328888-46328946 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UUUCCUCUGUUGCACAGUAUUGGGUUGGCUAAAAAGUUUGUUUGGGGUUUUCAUUACAUCUUACGGAAAAACCUGAAUGAACUUAUUGGCCAACUCAAUACAUGCUUGAUCCUGUCUUA
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Structure
        10          20        30        40        50         
UUUCCUCUGUUGCACAG--|              A     UG  UG  G     AUUACA 
                   UAUUGGGUUGGCUAA AAGUU  UU  GG UUUUC      \
                   AUAACUCAACCGGUU UUCAA  AA  CC AAAAG      U
AUUCUGUCCUAGUUCGUAC^              A     GU  GU  A     GCAUUC 
       110       100        90        80        70        60
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
 +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Star sequence

Bta-Mir-2285-P10_5p*

mirBase accessionNone
Sequence
0- AAAAAGUUUGUUUGGGGUUUUC -22
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Mature sequence

Bta-Mir-2285-P10_3p

mirBase accessionNone
Sequence
37- AAAACCUGAAUGAACUUAUUGG -59
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