MirGeneDB 3.0

MirGeneDB ID

Bta-Mir-2285-P5

Family name MIR-2285 (all species)
Seed AAAAAGU
Species Cow (Bos taurus)
MiRBase ID bta-mir-2284z-2
Paralogues Bta-Mir-2285-P1  Bta-Mir-2285-P2  Bta-Mir-2285-P3  Bta-Mir-2285-P4  Bta-Mir-2285-P6  Bta-Mir-2285-P7  Bta-Mir-2285-P8  Bta-Mir-2285-P9  Bta-Mir-2285-P10  Bta-Mir-2285-P11 
Orthologues
Node of Origin (locus) B. taurus
Node of Origin (family) B. taurus
Genome context
(GCF_002263795.1_ARS-UCD1.2_BTA)
NC_037338.1: 21349237-21349294 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AACAUAAGGCUCUUAAAGUGUUGAGUUGGCAAAAAAGUUUGUUUGGGUUUUUCUGUAAUAUCUUAAAAACCCAGAUGAACUUUUUGGCCAACCCAAUGCUAAUGGAUAAUGAAGCUCA
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Structure
        10          20        30        40        50        
AACAUAAGGCUCUUAAA--|     A      A        UG           CUGUA 
                   GUGUUG GUUGGC AAAAAGUU  UUUGGGUUUUU     A
                   CGUAAC CAACCG UUUUUCAA  AGACCCAAAAA     U
ACUCGAAGUAAUAGGUAAU^     C      G        GU           UUCUA 
      110       100        90        80        70        60
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
 +
Ad Bo Br Ce Co Co De Fe He Hy Ir Ki La Lo Mi No Op Or Pe Re Su Te
Mature sequence

Bta-Mir-2285-P5_5p

mirBase accessionMIMAT0025559
Sequence
0- AAAAAAGUUUGUUUGGGUUUUU -22
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Proposed targets TargetScanVert: bta-miR-2284z
Star sequence

Bta-Mir-2285-P5_3p*

mirBase accessionNone
Sequence
36- AAACCCAGAUGAACUUUUUGGC -58
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